Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq3496 399 5e-107 seq2639 349 9e-92 seq2452 194 4e-45 seq2562 170 5e-38 seq3282 167 6e-37 seq2339 167 6e-37 seq3088 156 1e-33 seq3480 111 4e-20 seq2294 105 2e-18 seq3702 89.7 1e-13 >seq3496 Length=5168 Score = 399 bits (442), Expect = 5e-107 Identities = 600/849 (71%), Gaps = 19/849 (2%) Strand=Plus/Plus Query 16802 CCAATCCGCCCACCACTGCATCATTTCTCTGCGCTTATCGAGATACTGAGCATGGTTGTA 16861 |||||| ||||||||||||||||| ||| ||||||| ||||| || ||||| ||||| || Sbjct 508 CCAATCAGCCCACCACTGCATCATCTCTTTGCGCTTGTCGAGGTATTGAGCGTGGTTATA 567 Query 16862 AATCCCACGCACAGATCCGCCGTTGGCATGTGCCAGTTGCACTTCAATAGCGTCAGCAGG 16921 ||| || || | || |||| | | || || || || ||| ||| || | ||||| || Sbjct 568 AATTCCTCGTATAGTGCCGCTGGTTGCGTGGGCAAGCTGCTTTTCTATCACATCAGCGGG 627 Query 16922 CCATTCGTGCTCGTTCATAATCGTGCTGAATTCATGCCTGAATCCGTGACCGCTTTCCAG 16981 |||| ||| || |||| | |||||||| | |||| ||| ||||| |||||| | | Sbjct 628 CCATCCGTTTTCATTCAGTACTGTGCTGAACTGGTGCCGGAACCCGTGCCCGCTTGCTAA 687 Query 16982 ACCTTCATAGCCGATTTGTTTGATCACAAGTAGTACAGCGTTCTCGCAAATTGGCTTCTT 17041 || |||||||||||||||||||| || |||| || || || |||| || ||||| | Sbjct 688 TCCCTCATAGCCGATTTGTTTGATGACGAGTAACACGGCATTTTCGCTGATCGGCTTTCT 747 Query 17042 CTTATCGTTGCGCCCGGCAAAAACAAACTCTGACACTGGTTTAGTGATTGAGCTT-AGCG 17100 || ||||| | || ||||| ||||| ||||| | | || || | |||| || | Sbjct 748 TTTGTCGTTCCTTCCAGCAAACACAAATTCTGATATA---TCGGTCATGG-GCTTGAGTG 803 Query 17101 TAGTGAGAAGTTCAATCACCTGGTCTGACATAGGAACCACATGAATTTTGCGTCCCTTCA 17160 | | | | | ||| || ||||| || || | ||||||||| | | ||||| Sbjct 804 TTTGCAACAATGCGGCCACTTGCGTAGACATCGGGACGAGATGAATTTTTCTGCTCTTCA 863 Query 17161 TCACACTGGCGTCGATAGTGATAATCCTGTTTTCAAAATCGACGTTCTTCCATTGCATGG 17220 | | | ||||| ||| |||||||||||||||||| | ||||| ||| | Sbjct 864 TTA------------TTGTGATCATCATGTTTTCAAAATCGACGTACCGCCATTTCATCG 911 Query 17221 AACGAAGCTCTTTCGTTCTTAGGGCTGTGTAGCGTAAAACTTTGGTCGCAATGAGCGATA 17280 | ||||| ||||| ||||| | ||| ||||| | || |||| ||| |||||| | || | Sbjct 912 AGCGAAGTTCTTTGGTTCTCATGGCGGTGTACTGCAATACTTGGGTGGCAATGCGTGAAA 971 Query 17281 CGATACTTCCTGAAAATGTTGCAAGTGCTTTGTTGAATGCCGGGATCTGGTCGGCAGGTA 17340 || | || ||||| | || || | ||| | ||||||||||| |||||||||||||||| Sbjct 972 CGGTGCTGCCTGAGTAGGTGGCTAATGCCTGATTGAATGCCGGTATCTGGTCGGCAGGTA 1031 Query 17341 AAAATGGGAAGTTTTTCTTGCGGTATCCTTTCATGGCGTCT-GCAAGGTCAGGTGCCGGG 17399 || || | || | |||||||| ||||||||||| ||| || |||||||||| || Sbjct 1032 GGAAGGGATAATTCTGTTTGCGGTAACCTTTCATGGC-TCTGGCGAGGTCAGGTGATGGA 1090 Query 17400 TTATATTTAGCCCTTCCGGTGACAATAGCGTAACGGAAAACCTCGCCGCATCTTCTGCGG 17459 |||||||| || || |||||| || ||||||| ||| || | || | || || Sbjct 1091 TTATATTTGGCTCTACCGGTGCTTATGGCGTAACTGAACACTGCACCAACGCGTCGACGT 1150 Query 17460 GCTTTGTTGGCTCGCTCCATTGCACCGCGATCTTCAAATCTGCGGATTACTTCCAGCAGT 17519 ||||| ||||||| |||||| || || || | ||||| ||||||| || || || Sbjct 1151 GCTTTATTGGCTCTCTCCATAGCGCCTCGGTTCTCAAACTTGCGGATAACCGACAAGAGA 1210 Query 17520 TGCATCGGCTCAATATCCTGAATTTCAAGGCCGCCGATGATGGGTAAAATGTCGTCATCA 17579 ||| ||||||| || | ||| || ||| || || || | ||| ||||||| Sbjct 1211 ACCATAGGCTCAACCTCTTCCATTCTGAGATGGCCTATCATTGGGAGAATATCGTCATTG 1270 Query 17580 AACATTTTTGCAAGTTCAGTTGCATAGCCTACTGACCAGACTTGCTTCTTGTGATCGTAC 17639 ||||| ||||||| | ||| ||| ||||||| || ||| |||||| | ||| Sbjct 1271 AACATGCGCTCAAGTTCTAGGGAATATCCTTCTGACCAAACCTGCCGCTTGTGGGCATAC 1330 Query 17640 CATTCCTTG 17648 || || ||| Sbjct 1331 CACTCTTTG 1339 >seq2639 Length=1078 Score = 349 bits (386), Expect = 9e-92 Identities = 414/552 (75%), Gaps = 8/552 (1%) Strand=Plus/Plus Query 35496 GAACTAAACCTCACCAAAGAACAGCATGAGTGGCTGAATGGCTGGCTTGAACTGTGGGGC 35555 ||||| || ||||| | || |||||| ||| | | || ||| | ||| | |||||| Sbjct 429 GAACTTAAACTCACGGATGACCAGCATCGATGGATTGAAGGGTGGTTAGAATTATGGGGC 488 Query 35556 GCATGGGTTTATTCAGGTCGTCTGGAAAAGCGCATGAGCAGCGTAATAGCGAAGTTCATG 35615 || |||||||||||||| | || || ||||| ||||||||||| ||| |||||||| Sbjct 489 GCGTGGGTTTATTCAGGGAGGCTAGAGAAGCGGCAAAGCAGCGTAATTGCGCAGTTCATG 548 Query 35616 GAGAGCGTAGAGCCGGGAAGAGTTATGACAAGGCCAATGTGCAATGATGATGATGGAATG 35675 ||||| |||||||| || || || |||| ||||| |||||||| |||||||| || ||| Sbjct 549 GAGAGAGTAGAGCCAGGCAGGGTGATGAGTAGGCCCATGTGCAACGATGATGACGGGATG 608 Query 35676 TTGATTTCTCAGGTCGTCGATTCCGTCATGTACATTGACAAGAAAGCCTTTGGCATCCTC 35735 |||||||||||||||||||||||||||||| |||||||| | | | || || || Sbjct 609 TTGATTTCTCAGGTCGTCGATTCCGTCATGCGCATTGACACAAGGTCGCTCGGTATTCTT 668 Query 35736 CTCAGCTACTACGCTCATGGTTCATCTAAGCGAGCAATTGCATCCTACTATCACGCGACT 35795 ||||||||||||||||| || ||||||||||||||||||||||| ||||||||| | Sbjct 669 CTCAGCTACTACGCTCACGGATCATCTAAGCGAGCAATTGCATCGTACTATCACAAAGCC 728 Query 35796 GCAAAGCCACGCAAGAT-GTGTGGACGTGGT--GGCGAGGGATGGAGAAAACCTTCACTG 35852 |||| ||||||||| || | || | | | || ||||| ||| | || || ||| | Sbjct 729 GCAAGGCCACGCAAAATCGACAGGGGGAGATTGGGTGAGGGGTGGCGTAAGCCGTCAGAG 788 Query 35853 GCAAC-CTGTAGAAACGAAATTGACGACATCCTGAAAGCGTCATTATTTGTTTTATACCA 35911 | | | ||| || || || ||| | || ||| | || | | | | || | ||| Sbjct 789 GAAGCGCTG-AGGAAAGAGATTTCACAGATACTGGAGGCTACGCTGTATATTCTCTACAC 847 Query 35912 GCCAATGCAAAATGCTTTCAAAATGCGTAAACGTGTTGAGAAAGTTAAGCATGTTGCTGT 35971 || ||| |||||| || |||| |||||| |||| | |||| |||| |||||||| | Sbjct 848 TCCGCTGCGAAATGCGTTTAAAAGTCGTAAAAGTGTGGCGAAAATTAAACATGTTGC-AT 906 Query 35972 TAAAAGCCTTGACATGCAATTAGCCATTTAGCCATAATTAGAAGGTAAGCTGCCGTTAGT 36031 ||| | |||||||| | ||| ||||||| ||||||| | | |||||||||||| || Sbjct 907 GAAAGGACTTGACAT-CTTTTACCCATTTACCCATAATCA-TATCTAAGCTGCCGTTCGT 964 Query 36032 GACTCTTAAGTT 36043 || ||||||||| Sbjct 965 GAGTCTTAAGTT 976 >seq2452 Length=2364 Score = 194 bits (214), Expect = 4e-45 Identities = 315/447 (70%), Gaps = 16/447 (4%) Strand=Plus/Minus Query 22194 TCCTTGAGTTTTGCCCTGTGCCATCCCTGCTTTTTATCGA--GAGATGTTTGTGCGAAAC 22251 ||||||| | ||| | | ||||||||||||||| |||| ||| | | | | ||| Sbjct 1564 TCCTTGAATGACGCCTTATTCCATCCCTGCTTTTTCTCGATGGAGCAGATAG--CAAAAT 1507 Query 22252 CTTCCTCAAGGTTATACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCATTG 22311 || || || |||||||| || ||||| ||||||||||| |||||||||||||||| Sbjct 1506 TCTCTTCCAGCGAGTACAGATAGCGTCCGATACCCCACTGAACAGCAGCGCGCTTCATTG 1447 Query 22312 CACCGGAACGACCACCTTTTACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATTTGG 22371 || || |||||| || || || || ||||| || || || || | ||||| || | Sbjct 1446 AGCCAGACATACCACCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACTTCG 1387 Query 22372 TTACCCATTCGGAATCAATCCTGATTGATATGCCGCATTCAACGCCTCCGT--TGTTGGG 22429 ||||||| || | ||| | || |||||||| || |||||| || | || || Sbjct 1386 TTACCCACTCATCACGAATACGAATGGATATGCCACACATAACGCCGCCATCAGGTCCGG 1327 Query 22430 AATATCGCGGTATTCATTGCGCC-ATCCTGCTTTGCCGCAAACATCGTCCAGGCGTTTCA 22488 | | | ||||||| || || || |||| || ||||| |||||||| ||||||| Sbjct 1326 GAGA-----GAATTCATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTTTCA 1273 Query 22489 TGATTGCCCGGTTCGTGACATAAGCCAGCACCATAGCCCACACTTTGCCATCGCGTGTTT 22548 |||| |||||||| || ||||| || || ||||| ||||| ||| | | || | Sbjct 1272 TGATGGCCCGGTTAGTTACATAGGCAAGAACCATTGCCCAAGGGTTG---TTGTTTGATA 1216 Query 22549 TACCGCTTTGCTGTATTCGCCATTCGATATCTTCAGGGCTGAATGGCTCATCGAATTTAT 22608 | |||| | |||| | |||||||||||||| ||| ||| ||| |||| |||| Sbjct 1215 TTCCGCATCGCTGAACGCGCCATTCGATATCATCAATCGGGAACGGCGCATCTAATTGTG 1156 Query 22609 TCAAATCCATAATTCACCTCAGAATGG 22635 || ||||| |||||||||||||| Sbjct 1155 ATAATTCCATTGCTCACCTCAGAATGG 1129 Score = 179 bits (198), Expect = 9e-41 Identities = 276/394 (70%), Gaps = 0/394 (0%) Strand=Plus/Minus Query 21561 TGCTTGCCACCAAGCATTTGCATGGTTCCACCAACGCCTACGATAACTTCGGTAGTGAAC 21620 ||||| || |||||||| ||||| | ||| |||| | || | ||||| || ||| | Sbjct 2206 TGCTTACCGCCAAGCATCTGCATTGATCCGCCAATATCGACAACTACTTCCGTTGTGTAT 2147 Query 21621 CTATCCTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACC 21680 || || || || || || ||||| || ||||| ||||||| ||| || | ||| ||| Sbjct 2146 CTGTCTTGCCCTGACTGGTCTTGCCACTTCCTTGTGCGCAATTGGCCCTCGATATATACC 2087 Query 21681 TCAGAGCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACG 21740 | || || || || |||||||| | || | ||||||| || ||| || ||| Sbjct 2086 TGCGAACCCTTGCGTAGATATTCACCAGCCACCTCTGCCAACTTTCCGTACAGCGTGACG 2027 Query 21741 CGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGAC 21800 || ||||| ||||| ||||||| ||||||||||| ||||| || | |||| || || Sbjct 2026 CGATGCCATTCCGTGCGCTCCTTCTGCTCTCCAGTCTGCTTGTCTCTCCATGAATCAGAA 1967 Query 21801 GTAGCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCA 21860 || || || || |||||||| | |||| ||| |||| || | | || || || Sbjct 1966 GTGGCTACAGTCAGGTTTGCCACTGCCCATCCGCTCGGTGTGTAGCGCACTTTGGGGTCT 1907 Query 21861 TGCCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTATGCCGCC 21920 ||||| ||| | || | | ||||| || ||||||||||| | ||||||| |||||| Sbjct 1906 TGCCCGAGGTGTCCCACGAGAATCACTTTGTTTACGCCTCTCTGTCCCATTTACGCCGCC 1847 Query 21921 TGTTTTAGCTCGTTAACTCTGATGTTCATTACCT 21954 | ||| || || | | ||| || |||| |||| Sbjct 1846 TTTTTCAGTTCATGGAATCTCATCCTCATAACCT 1813 >seq2562 Length=1341 Score = 170 bits (188), Expect = 5e-38 Identities = 181/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 29879 GGCATGATTCTGGTCGATTACCTGACACTAATGACCGCTGAGAAGGCCGATCGCAACGAC 29938 ||||||||| || ||||||||||| || ||||| | || || |||||| ||| | Sbjct 459 GGCATGATTGGCGTGGATTACCTGACGCTGATGACGACCGATAAAGCCGATACCAATGCG 400 Query 29939 CTTGCTTACGGCATGATCACCAAAGGACTGAAGAACCTTGCCAAAGAGCTTGATTGCGTT 29998 || || | |||| |||||||| | ||||||||||||||||||||||| ||| ||| Sbjct 399 CTGGCGTTTGGCAATATCACCAAGGCGCTGAAGAACCTTGCCAAAGAGCTGGATACCGTC 340 Query 29999 GTTGTGCTTCTGACACAGCTTAACCGCGCACTGGAAAGCCGAACCAATAAACGCCCATTA 30058 || ||||| ||||| ||||| |||||| |||||| || |||| |||||||| | Sbjct 339 GTGGTGCTACTGACCCAGCTAAACCGCAATCTGGAAGAGCGCGCCAACAAACGCCCCATG 280 Query 30059 CCAAGTGACTCACGAGATACAGGGCAGATTGAACAGGATTGCGATTATTGGGTGGGGAT 30117 || |||||| || || | || |||||||| |||||||| ||||||||| |||| || Sbjct 279 CCCAGTGACAGCCGGGAAAGTGGTCAGATTGAGCAGGATTGTGATTATTGGTTGGGTAT 221 >seq3282 Length=7904 Score = 167 bits (184), Expect = 6e-37 Identities = 244/345 (71%), Gaps = 0/345 (0%) Strand=Plus/Minus Query 21566 GCCACCAAGCATTTGCATGGTTCCACCAACGCCTACGATAACTTCGGTAGTGAACCTATC 21625 ||| || ||||| ||||||| || || | |||| | ||||| || || | | ||| Sbjct 7599 GCCGCCCAGCATCTGCATGGAGCCGGAAATGTCTACCACTACTTCCGTGGTATAACGATC 7540 Query 21626 CTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 21685 ||| ||||| |||||||||||||| | || |||| || ||||||| ||| |||| || Sbjct 7539 CTGCCCGCTCTGATCCTGCCATTTACGCGTGCGCAGTTGACCTTCAACATACACCTGTGA 7480 Query 21686 GCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTG 21745 |||||| ||||| ||||| | || | ||| ||||| || ||| || |||||||| Sbjct 7479 GCCTTTGCGCAGGTATTCTCCAGCCACTTCAGCCAGCTTTCCGTACAGCGTGACGCGGTG 7420 Query 21746 CCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGC 21805 ||| || || |||| || ||||| || || ||||| || ||||| |||||||| || Sbjct 7419 CCATTCTGTGCGCTCTTTCTGCTCACCGGTCTGCTTGTCGCGCCAGGTATCTGACGTGGC 7360 Query 21806 AACTGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCC 21865 | || ||||| |||| || || || ||| | || ||| || || ||||| Sbjct 7359 CAGAGTCAGGTTAGCAACGGCACCACCGTTCGGCAGATAACGGACTTCCGGGTCTTGCCC 7300 Query 21866 AAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 21910 || || | || ||||| ||||| ||||||||||| ||||| Sbjct 7299 CAGATTCCCGACAAGAATCACTTTATTAACGCCTCTGCTGGCCAT 7255 >seq2339 Length=4802 Score = 167 bits (184), Expect = 6e-37 Identities = 255/359 (71%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 13705 CCGGAGCAAATTAAATGACAGACATTATAACCAATGTTGTAATTGGGATGCCTTCGCAAC 13764 |||||| || | ||| | || |||| | |||||||| | ||||| ||||||| Sbjct 956 CCGGAGAAATATTTATGGCCGATATTACGCCAAATGTTGTTGTATCCATGCCGTCGCAAC 1015 Query 13765 TCTTCACTATGGCTCGTTCTTTTAAAGCC-GTAGCCAATGGCAAAATTTATATCGGTAAA 13823 | ||||| | || | || ||| || ||||| |||||||||||||||||||| ||| Sbjct 1016 TGTTCACCCTACGCCGGGCGTTCAAATCCTGTAGC-AATGGCAAAATTTATATCGGAAAA 1074 Query 13824 ATTGACACTGACCCGGTAAAT--CCTGAAAACCAGATTCAGGTTTATGTAGAGAATGAAG 13881 ||||| || | || || | || ||||||||||| |||| || | || || |||| Sbjct 1075 ATTGATACCGCTCC--TACCTTACCAGAAAACCAGATACAGGCCTACCTGGAAAACGAAG 1132 Query 13882 ACGGATCTCACGTCCCTGTTTCTCAGCCAATTGTTATCAATGCTGCCGGATATCCTGTGT 13941 | ||||| | ||||| || ||||| || | ||| | | | || ||||| || | Sbjct 1133 ATGGATCGTATAGTCCTGTCTCCCAGCCGCTTATCATCGGTACCGGAGGGTATCCAGTCT 1192 Query 13942 ACAACGGGCAGATTGCCAAATTTGTAACTGAGCAAGGCCATTCAATGGCTGTATATGATG 14001 | ||||||||||||||||||||||| || | |||||| || ||||| | || || | Sbjct 1193 ATAACGGGCAGATTGCCAAATTTGTGACCGTGCAAGGTCACAGCATGGCGATTTACGACG 1252 Query 14002 CGTATGGTTCGCAGCAGTTCTATTTTCAGAATGTGCTGAAGTACGACCCTGATCAGTTC 14060 | || |||||| |||||||| ||| ||||| ||||| ||||| ||||||||| Sbjct 1253 CCTACAACGTGCAGCAATTCTATTTCACGAACGTGCTTAAGTATGACCCGGATCAGTTC 1311 >seq3088 Length=8023 Score = 156 bits (172), Expect = 1e-33 Identities = 178/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 6836 ATGCCGATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTCCGAAACGCCGAC 6895 ||||||||||| ||||| || || ||||| || || ||| ||||||| |||| ||| Sbjct 329 ATGCCGATTCAACAACTCCCTCTAATGAAGGGGACGGGTAAAAACTTCCGCGACGCTGAC 270 Query 6896 TATATCGACTATCTGCCAGTGAATATGTTGGCTACACCAAAAGAAATCCTTAACAGCAGC 6955 ||| |||| || || || ||||||||||| ||||| || || | || || |||| | Sbjct 269 TATGTCGATCTGCTTCCGGTCAATATGTTGGCGACACCCAAGCAAGTACTGAATAGCAAC 210 Query 6956 GGATATCTTCGCTCATTCCCGGGCATTGCCAAACGTTCTGATGTGAACGGCGTATCGCGT 7015 |||||| | ||||| ||||| ||||| | ||| || || ||||| || ||||||||| Sbjct 209 GGATATTTGCGCTCCTTCCCCGGCATAGACAAGCGCTCAGATGTTGCAGGGGTATCGCGT 150 Query 7016 GGCGTCGAGTACAACATGGCGCAGAATGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTA 7074 || | || ||||| ||||||||||| || |||||||| || || || | ||||| Sbjct 149 GGGGCAATGTTCAACACTGCGCAGAATGCCGTATATCGCGTTTGCGGAGGTAGTCTGTA 91 >seq3480 Length=19940 Score = 111 bits (122), Expect = 4e-20 Identities = 272/404 (67%), Gaps = 14/404 (3%) Strand=Plus/Minus Query 711 GGCATCAAAAACAACCCGACGAAGATTAAATC-GCTCGAAGGCATTGATATCTGCTGGGT 769 ||| |||| || ||| ||||| | || || |||| | || | | |||||||||||| Sbjct 17843 GGCGTCAAGAATAACGTCACGAAAGTGAAGTCTGCTC-AGGGTGTCGGTATCTGCTGGGT 17785 Query 770 GGAAGAAGCGGAAGCGGTAACAAAGGAATCGTGGGATATCCTGATACCAACCATCCGC-- 827 |||||||||||||| || |||||||| || ||||| ||||| | || | || ||| Sbjct 17784 TGAAGAAGCGGAAGCCGTGACAAAGGACTCTTGGGACATCCTCTTGCCCTCAATACGCGG 17725 Query 828 -AAGCCGTTCTCTGAAATATGGGTGAGCTTTAACCCGAAGAACATACTCGACGATACCTA 886 | | | | ||| | ||| | |||||| || || ||||| || || ||||| || Sbjct 17724 AGATAAGAACGCCGAAGTGTGGATTTCCTTTAATCCTAAAAACATCCTTGATGATACGTA 17665 Query 887 TCAGCGATTCGTAGTAAACCCTCCCGATG--ATATTTGTCTGCTGACGGTGAACTACACC 944 ||| |||||| | || || || ||| | | | | || |||| || ||||||| | Sbjct 17664 TCAACGATTCATTGTTAATCCGCCCAAAGGCGCAATCATC--CTGAAGGCTAACTACAGC 17607 Query 945 GACAACCCGCACTTTCCTGA---AGTTCTCCGTCTGGAGATGGAAGAGTGTAAA-CGCAG 1000 || || || | || | ||| |||| || |||||| ||||| ||| || Sbjct 17606 GATAATCCCTATTTCCATGACTCCCCACTCCCTCAACAGATGGCGGAGTGCAAAGAGCGT 17547 Query 1001 AAACCCGACACTGTATCGTCACATCTGGCTTGGTGAGCCGGTAAGCGCAAGTGATATGGC 1060 | ||| ||||| || || ||||||||||| ||||| ||| | ||||| ||| Sbjct 17546 GATGTTGAC-CTGTACCGCCATATCTGGCTTGGGGAGCCAGTATCTGACAGTGAATTGGT 17488 Query 1061 AATCATCAAACGTGAATGGCTTGAAGCCGCAACCGATGCGCACA 1104 |||||||| | ||| | |||||||| | ||||| |||| Sbjct 17487 CGTCATCAAATATTCCTGGATAGAAGCCGCTATTGATGCCCACA 17444 >seq2294 Length=3897 Score = 105 bits (116), Expect = 2e-18 Identities = 417/639 (65%), Gaps = 44/639 (7%) Strand=Plus/Minus Query 9989 AATCTGGCAAACGTTGGGCTTGGTGCTCTGCAAGGTCAGGCAAACGCCGGGCAGACGTAC 10048 |||||||||||| ||||||| ||||| ||||||||||||| || ||||| ||||| || Sbjct 3889 AATCTGGCAAACATTGGGCTGGGTGCATTGCAAGGTCAGGCCAATGCCGGTCAGACATAT 3830 Query 10049 GCCAACAACATGAGC-AGCATTGCACAGCAAAGCGCAGCTCTTGCCGCTGCTAATGCCAA 10107 ||||| ||| || ||| || | ||||| ||| | || || || |||||||| || Sbjct 3829 GCCAATAACGCAGGCCAGCTTTAC-CAGCAGCAGGCATCACTGGCGGCGGCTAATGCTAA 3771 Query 10108 CAAACCATCAAGTCTTCAGACAGCAATTAGTGGCGGAACGTCTGGTGCGATTGCCGGTGC 10167 || |||||| || |||| || |||||| | | ||| |||| Sbjct 3770 CAGGCCATCAGCGGCGCA-ACAGGG--TATTGGCGGGGCCTTGAGTG---------GTGC 3723 Query 10168 AGGTC--TTGCCA-GCCTTTTGGAAACATCAACACCTTGGGGAGCTGGCATTGGTGCTGG 10224 ||| ||| || | | |||| | || ||||| || | ||||||| || Sbjct 3722 --GTCGATTGGCATGGGTATTGGTGGC-------CCGTGGGGTGCGGCTATTGGTGGCGG 3672 Query 10225 TATCGGATTGCTTAGCTCGTTGTTTTAAGGGGTAATCATGGCTACTTGGCA-AGGATCAA 10283 | || ||||| | | |||| ||| || || |||||| ||| | || || Sbjct 3671 GCTTGGCTTGCTCGGAGGGCTGTTCTAATGGCTA--CATGGCA-----GCAGAATATTAA 3619 Query 10284 AT--GGCGGATTGTTAGCTGGTATCGGCGGCGTCAACTCA-AACGCTCCGAGCGTAAATG 10340 | ||||| | | ||||| || |||||| || | | | || || || ||| | | Sbjct 3618 CTCAGGCGGCCTTCTGGCTGGAATTGGCGGC-TCGAATGAGAATGCACCCCGCGCCAGCG 3560 Query 10341 ACATCGGCAATACG-CT-TCAGCTT-ATCAGGCAGAACAATGATATTGAGCGTTCAGGCG 10397 || || ||| | || || || | || | |||||||| || ||| || | |||| Sbjct 3559 ACGTC---AATGCCACTCTCGGCATGATTCGCCAGAACAACGACTTTGCCCGCGCTGGCG 3503 Query 10398 CTAACAATGTTGGGCTTACTGCTTTGCAAGGCCTTTCAGGCATTGCAGGGGTGTTTCAGC 10457 ||| || ||||| | || ||||| || ||| || | ||| ||||| ||||| Sbjct 3502 GTAATAACGTTGGATTGCAGGCGTTGCAGGGGCTTGGCGGTTTGGCACAGGTGTATCAGC 3443 Query 10458 AGGAAAAGCAGGCTCGGCGGCAGAAAGAATTTCAGCAGGCGTACGCTAATGCTTATGCGT 10517 | | |||| || ||| ||||||| ||| ||||||| ||||| || || | | | Sbjct 3442 AAAACCAGCAAGCAGAGCGTCAGAAAGCATTCCAGCAGGAGTACGGCAACGCCTTTAAAT 3383 Query 10518 CTGGTGATCGCGGTGCTTTGCGTCAGTTGGCTACTCAATATCCAGACCAGATTGAATCCG 10577 |||| || || || ||||| | ||||| | |||| || |||||| | || | Sbjct 3382 CTGGCGACCGTAACGCCATGCGTGATTTGGCAGCGAAATACCCTGACCAGTTCGAGAATG 3323 Query 10578 TTCGTAAAGGCATGGGATTCATTGATGAAGACCAGCGCA 10616 | | |||||||||||||||||||| || ||||| |||| Sbjct 3322 TGCAGAAAGGCATGGGATTCATTGACGATGACCATCGCA 3284 >seq3702 Length=11964 Score = 89.7 bits (98), Expect = 1e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29891 GTCGATTACCTGACACTAATGACCGCTGAGAAGGCCGATCGCAACGACCTTGCTTACGGC 29950 || ||||| || || || ||| || ||| ||| || ||| ||| | ||| ||| Sbjct 5906 GTTGATTATCTCACCCTGATGCGCGGTGAAGCGGCAGAGCGCCGCGATATCAGTTATGGC 5965 Query 29951 ATGATCACCAAAGGACTGAAGAACCTTGCCAAAGAGCTTGATTGCGTTGTTGTGCTTCTG 30010 |||||||| || || || || || || ||||| || |||||| | || |||| || Sbjct 5966 GCGATCACCACCGGGCTTAAAAATCTGGCGAAAGAACTGGATTGCATCGTGCTGCTGCTT 6025 Query 30011 ACACAGCTTAACCGCGCACTGGAAAGCCGAACCAATAAACGCCCATTACCAAGTGACTCA 30070 || ||||| ||||| | | |||| || || | |||||||| |||||| |||| Sbjct 6026 ACCCAGCTAAACCGTGGATTGGAGCAGCGCGCCGACAAACGCCCTTTACCATCTGACAGT 6085 Query 30071 CGAGATACAGGGCAGATTGAACAGGATTGCGA 30102 ||||| ||||| || || ||||||||||| Sbjct 6086 AAGGATACCGGGCAAATCGAGCAGGATTGCGA 6117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124810118670080