Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq88 96.9 2e-15 >seq88 Length=1565181 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 |||| ||| ||||| | || ||||| ||||||||| ||||| ||||||| |||||| Sbjct 328623 GCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCCCATG 328682 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || | | | | ||||| || ||||| ||||||||| |||| ||| | ||||| Sbjct 328683 TCTGCGCTTCGT-TGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTGGAC 328741 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACAC 25685 | | || ||| || |||||||| || | | |||| |||||||||||||| | Sbjct 328742 GAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCGCAGAT 328801 Query 25686 GATGATGCACCTGTCTTCTGGGTTGTCCCT 25715 ||||| | | ||| || || |||| ||| Sbjct 328802 TATGATCCTTCGGTCGTCCGGATTGTGCCT 328831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340121150945664