Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq2759 192 2e-44 seq2728 172 1e-38 >seq2759 Length=1061 Score = 192 bits (212), Expect = 2e-44 Identities = 481/731 (66%), Gaps = 15/731 (2%) Strand=Plus/Plus Query 26128 TTTCATGGCGTCGAGCAGGATGTCCTGCACGGCGCGCTTCGTTTCGCGGCGCTCGACGAC 26187 |||||| || |||||||||||||||||||| |||| || | ||||| | || | || Sbjct 304 TTTCATCGCTTCGAGCAGGATGTCCTGCACTTCGCGTTTTGAATCGCGCCTCTGCATTAC 363 Query 26188 GTCCTCGTCGATCGTGTCGCGCGCGATGATCGGGTAGATGAAAACGGGGCGGCGGTGGCC 26247 ||||| | || ||| ||||| || ||| || || || |||||| || || Sbjct 364 CAGTTCGTCTACGGTATCGGCGGCGATAATGTGGTGAATAAATACCGGGCGGTTATGCCC 423 Query 26248 GGCCTGCAGCTGGCGCACGGGTCCGATCCGCTCGACGATCTGCAGGTATTCCTCGAGGTT 26307 ||||| | |||||| || || || || |||| ||| || |||| | || | | Sbjct 424 TGCCTGTATCTGGCGTGTCGGGCCTATACGTTCGATGATTTGTTGGTACTGTTCCAAATC 483 Query 26308 CCACCAGTGGCCGAAGACCGCAAGGATGTTGCCGCCGTCCTGCAGGTTCAGGCCGTGGCC 26367 ||||||||| ||| | | | || || || ||||||||||||| |||||||||||||| Sbjct 484 CCACCAGTGCGAGAAAAACACCAGAATATTTCCGCCGTCCTGCATATTCAGGCCGTGGCC 543 Query 26368 GGCGCTGGCCGGGTGCGCGAACATCACCGGGATCTTGCCAGCGTTCCAGTCGCGGATCGT 26427 |||||||| ||||| || || | || || || || || |||||||||||||| | ||| Sbjct 544 TGCGCTGGCTGGGTGAGCAAAAAGGACAGGTATTTTTCCGGCGTTCCAGTCGCGCAGCGT 603 Query 26428 CTGCGGGTTCTGGTCGAGCTGGCGGCCGCGCGGGAACGCGCGCTGCAGCCGCGCGAGATC 26487 |||||| | || ||| | || || || || | | | || || | ||| Sbjct 604 CTGCGGATCGGAATCAAGCGGTTTACCCTTTGGAAAGGCTTTCAGTAAACGGGCTAAATC 663 Query 26488 CGACTTGAAGTGGTAGGCCACGAGCACGGGCATGCCGGCCGCTTCCTCGACGATTTCCTC 26547 || ||||||||||| || ||||| ||| |||||| ||||| ||| || || Sbjct 664 GCTTTTAAAGTGGTAGGCAACCAGCACCGGCGCGCCGGCGGCTTCGGCGAGAATGCTGTC 723 Query 26548 GAGCGCCTGCAGTTTCAGGTCGTGCACCTCGTGCCACGGTGCGGTGTCGCTGCCGTCGTC 26607 || ||||| || ||| ||||| | || ||| ||| ||| || |||| Sbjct 724 CAGTGCCTGTAGCTTCGCATCGTGGATTTCTGACCA--------TGTGCCTG-CGCCGTC 774 Query 26608 CTCCTGCTTGTAGACGGCGCCGTTCGCGAGCTGCAGGCATTTCATCGTCTTGCTCGCCGC 26667 | |||| |||||| | || | |||| ||||||| || || || || Sbjct 775 ------GGTATAGATTGCGCCGCTGGCAATTTGCAAACATTTCACTGTTTTTGCGGCGGC 828 Query 26668 GTTCATGGCCTCGATCGGGCTGTCGTCGATCTCCATGAACATCTGCCGTTCCATGTCGCG 26727 |||| || ||||| | || ||| | |||| ||||||||| |||||| || | Sbjct 829 GTTCTGCGCTTCGATGTCGGTGCTGTCCAGTTCCAGAAACATCTGCTTTTCCATTTCCTG 888 Query 26728 ATACAGCCGTCGCGCGGCCGCGGGCAGCTCGACATAGACCGGGCGCACGATCGGCTCGTC 26787 |||| | | | ||| ||||||| || || || | | |||||| || || Sbjct 889 ATACTGTTGCCTCGCCTTTGCGGGCATCTGCACCCGGATCACGTTGTGGATCGGTTCCTC 948 Query 26788 CAGGTCGAACCAGTCGGCCGGGTCGAGCGAGATCGTGCAGTCGGCGAGCGCCTTCTGAAT 26847 | || |||||||||| | || ||||| | ||| ||| || | || |||||| Sbjct 949 AATATCAAACCAGTCGGTGGCATCAAGCGACACGGTGACGTCAGCCAATGCGCGCTGAAT 1008 Query 26848 TTCATCCTGCG 26858 ||| ||||||| Sbjct 1009 TTCGTCCTGCG 1019 >seq2728 Length=1005 Score = 172 bits (190), Expect = 1e-38 Identities = 241/338 (71%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 26129 TTCATGGCGTCGAGCAGGATGTCCTGCACGGCGCGCTTCGTTTCGCGGCGCTCGACGACG 26188 ||||| || || ||||||||||||||||| | || || | ||||| || || | || Sbjct 939 TTCATAGCTTCCAGCAGGATGTCCTGCACTTCTCGTTTTGAATCGCGCCGTTCCATCACA 880 Query 26189 TCCTCGTCGATCGTGTCGCGCGCGATGATCGGGTAGATGAAAACGGGGCGGCGGTGGCCG 26248 ||||| | ||| || ||||| || ||| || || || |||||| || || Sbjct 879 AGTTCGTCTACGGTGCCGGCGGCGATCATGTGGTGAATAAATACCGGGCGGTTATGCCCT 820 Query 26249 GCCTGCAGCTGGCGCACGGGTCCGATCCGCTCGACGATCTGCAGGTATTCCTCGAGGTTC 26308 ||||| | |||||| || || || || |||| ||| || |||| | ||| || | | Sbjct 819 GCCTGTATCTGGCGTGTCGGCCCTATACGTTCGATGATTTGTTGGTACTGCTCCAGATCC 760 Query 26309 CACCAGTGGCCGAAGACCGCAAGGATGTTGCCGCCGTCCTGCAGGTTCAGGCCGTGGCCG 26368 |||||||| ||| | | | ||||| || ||||| ||||||| ||||| || |||| Sbjct 759 CACCAGTGAGAGAAAAACACCAGGATATTTCCGCCATCCTGCATATTCAGACCATGGCTT 700 Query 26369 GCGCTGGCCGGGTGCGCGAACATCACCGGGATCTTGCCAGCGTTCCAGTCGCGGATCGTC 26428 || ||||| || || ||||||| ||||||||| || || |||||||| | ||| | |||| Sbjct 699 GCACTGGCAGGATGGGCGAACAACACCGGGATTTTTCCGGCGTTCCAATTGCGTAACGTC 640 Query 26429 TGCGGGTTCTGGTCGAGCTGGCGGCCGCGCGGGAACGC 26466 || |||| | || || || | ||||||||||| || Sbjct 639 TGTGGGTCGTCATCAAGGTGACAACCGCGCGGGAAGGC 602 Score = 89.7 bits (98), Expect = 1e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 26936 AAGCTGCGCCCGAGTCGCTGGCCGCCGTCGACGAACCACTGCTGGCCCCACAGATCCTGC 26995 ||| | |||||||| |||||||| ||||| ||||| |||||||||||| || | Sbjct 181 AAGGTACGCCCGAGACGCTGGCCATGATCGACAAACCATGACTGGCCCCACAGGTCGATC 122 Query 26996 AGGCCGTTCGGCGACGGTGTGCCGGTGAGGTTCACCCATCCGTGCACCTTCGTGTGCGCA 27055 ||||||||||||| || || |||||||| |||| ||| | ||| || | | | ||||| Sbjct 121 AGGCCGTTCGGCGCAGGCGTACCGGTGAGATTCATCCAGCGGTGTACGTGCTTATGCGCG 62 Query 27056 AC 27057 || Sbjct 61 AC 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135600010226432