Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq10 127 2e-24 seq676 118 1e-21 seq14 109 5e-19 >seq10 Length=2352850 Score = 127 bits (140), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 94770 AATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGT 94829 ||||||| | || ||||| | || | |||||||| | |||||||| || || | || Sbjct 821268 AATTTTAGAAGCCACCTCTGAGACGAAGAACCAAGTGGAGTGTAGATTCTTTCTGGATGT 821209 Query 94830 TATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCT 94889 | || ||| || ||| | ||| ||||| ||||| || ||||||| || | || | Sbjct 821208 TGTAGTCGGACAAAGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAAACGCTGTT 821149 Query 94890 GATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949 ||||||||||||| || || ||||| | ||||| ||||||||| | | ||||||| Sbjct 821148 GATCTGGAGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAG 821089 Query 94950 CGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || ||||| || ||||| || || |||||||| Sbjct 821088 AGGCCTCTACTTCGAGTGTGATGGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 821031 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||||||||||| |||| |||||||| | || ||||| || || | ||| || || Sbjct 820349 CATTCCTCCTCTCAGACGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTC 820290 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 || ||| || ||| ||||| ||||| || | ||||| || | ||||| ||||| Sbjct 820289 TGACAGAGTTCTGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGG 820230 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||||| || || ||||| | || || ||||||||| | | ||||||| || Sbjct 820229 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTC 820170 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||| ||||| || || ||||| | ||||||||| || |||||||| Sbjct 820169 CACTTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACGAAAATCTGCAT 820119 Score = 118 bits (130), Expect = 1e-21 Identities = 155/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||||| ||| ||||||||||| | ||| || || | | || ||| | ||| | Sbjct 819871 ACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTC--TGAGAGGGTTCGGCCATCTT 819814 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | |||||| |||||||| || || |||||||| | Sbjct 819813 CCAACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCT 819754 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || || ||||| | | ||||||| | ||||| || | |||||||| | Sbjct 819753 GGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCT 819694 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||| | || ||||| ||||||||||||| Sbjct 819693 TTCCAGTCAACGTCTTCACGAAGATCTGCATGC 819661 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| ||| |||||||| || | ||| || || | ||| || ||| ||| Sbjct 820783 ACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTCCTGCCATCTTCC 820724 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| || | ||||| | | ||| || ||||||||||| || ||||| || | Sbjct 820723 AATTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGG 820664 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||||||| | | ||||||| | || || || | |||||||| || Sbjct 820663 ATCTTCGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTTG 820604 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| || ||||| |||||||| Sbjct 820603 CCAGTCAGAGTCTTGACAAAAATCTGCAT 820575 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| || | |||||| |||||||| || || ||||| Sbjct 819134 ATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819075 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | ||||||| | ||||| || | ||||| Sbjct 819074 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819015 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| |||||||| | || ||||| ||||||||||||| Sbjct 819014 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCATGC 818977 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| || | |||||| |||||||| || || ||||| Sbjct 819362 ATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819303 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | ||||||| | ||||| || | ||||| Sbjct 819302 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819243 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| |||||||| | || ||||| ||||||||||||| Sbjct 819242 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCATGC 819205 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| | | |||||| |||||||| || || ||||| Sbjct 819590 ATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819531 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | ||||||| | ||||| || | ||||| Sbjct 819530 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819471 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| |||||||| | || ||||| ||||||||||||| Sbjct 819470 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCATGC 819433 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||||| || | ||||| || | || |||||||| || ||||||||||| Sbjct 820045 TCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTA 819986 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| || || || | | |||||||| ||||| || | |||||| Sbjct 819985 TCTTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGACTTCCAGGGTGATG 819926 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | || || ||||| |||||||| Sbjct 819925 GTTTTGCCAGTCAATGTCTTAACAAAAATCTGCAT 819891 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||||| || | ||||| || | ||||| ||||| ||||| || ||||| Sbjct 820958 ATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTT 820899 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | |||||||| | || || || | ||||| Sbjct 820898 GTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCTACTTCCAGTGTGAT 820839 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || ||||| | || || |||||||||||||||| Sbjct 820838 GGTCTTCCCAGTCAATGTCTTTACAAAGATCTGCATGC 820801 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| | | |||||| |||||||| || || ||||| Sbjct 818906 ATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTT 818847 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | ||||||| || || || | ||| || Sbjct 818846 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGCCTCAACCTCCAACGTAAT 818787 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| | |||||||| ||||||||||| Sbjct 818786 GGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 818751 >seq676 Length=265522 Score = 118 bits (130), Expect = 1e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||| | | ||| | |||||||| | |||||||||||| || | ||| | Sbjct 178092 TTTGCATACCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGT 178151 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | |||| |||||| ||||| ||||| | ||||| | ||| ||||| | Sbjct 178152 AATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGT 178211 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||| || || ||||| | ||||| ||||| || | | ||||| | | Sbjct 178212 CTGGGGGAATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAGG 178271 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| || ||||| ||||| || || || || || ||||||||||| Sbjct 178272 CCTCGACCTCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 178326 Score = 113 bits (124), Expect = 4e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||| | | ||| | |||||||| | |||||||||||| || | ||| | Sbjct 177636 TTTGCATACCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGT 177695 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | |||| |||||| ||||| ||||| | ||||| | ||| ||||| | Sbjct 177696 AATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGT 177755 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||| || || ||||| | ||||| ||||| || ||| ||||| | | Sbjct 177756 CTGGGGGAATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGG 177815 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| || ||||| ||||| || || || || || || || ||||| Sbjct 177816 CCTCGACCTCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAATATTTGCAT 177870 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | ||| | |||||||| | |||||||||||| || | ||| ||||| Sbjct 178328 CCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 178387 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| || |||| |||||||| | ||||| | ||| ||||| ||||| ||| Sbjct 178388 AGAGTGCGACCGTCTTCCAATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 178447 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || |||||||| ||| ||| || |||| | ||||| Sbjct 178448 ATTCCCTCCTTATCCTGGATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCGACC 178507 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || |||||||| || |||||||| Sbjct 178508 TCGAGGGTGATGGTCTTGCCCGTCAGCGTTTTCACGAATATCTGCAT 178554 Score = 109 bits (120), Expect = 5e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||| | | ||| | |||||||| | ||||||||||| || | ||| | Sbjct 177864 TTTGCATACCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGT 177923 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | |||| |||||| ||||| ||||| | ||||| ||||| ||||| | Sbjct 177924 AATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGT 177983 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||| || || || || | || || ||||| || ||| ||||| | | Sbjct 177984 CTGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCGGAGG 178043 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 178044 CCTCGACCTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 178098 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | ||| | |||||||| | ||||||||||| || | ||| ||||| Sbjct 177416 CCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAA 177475 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| |||||| ||||| ||||| | ||||| | ||| ||||| || || ||| Sbjct 177476 AGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCGGGGGGA 177535 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | ||||| ||||| || ||| ||||| | | ||||| Sbjct 177536 ATTCCCTCCTTATCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACC 177595 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 177596 TCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 177642 >seq14 Length=2234412 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | ||| ||||| || ||| |||||| Sbjct 1933606 ACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCATCCTCG 1933547 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || | || || | || ||||| ||||| ||||| || || ||||| | | Sbjct 1933546 AGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1933487 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| || ||||| ||| ||||||| || || || | |||||||| || Sbjct 1933486 ATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATGGTCTTC 1933427 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || ||||| || |||||||||||| Sbjct 1933426 CCAGTTAGGGTTTTTACGAAGATCTGCATG 1933397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448268964756480