Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq3282 140 1e-28 seq2452 104 1e-17 >seq3282 Length=7904 Score = 140 bits (154), Expect = 1e-28 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223 |||||| |||| |||||| |||| ||||| |||||||| || ||| | || | || Sbjct 7599 GCCGCCCAGCATCTGCATGGAGCCGGAAATGTCTACCACTACTTCCGTGGTATAACGATC 7540 Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283 ||| ||| ||| ||||||| || || ||||| || ||||| | || ||||| || Sbjct 7539 CTGCCCGCTCTGATCCTGCCATTTACGCGTGCGCAGTTGACCTTCAACATACACCTGTGA 7480 Query 11284 GCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTG 11343 ||| || |||||||||| | || | ||| |||||| || | ||| ||| ||||| Sbjct 7479 GCCTTTGCGCAGGTATTCTCCAGCCACTTCAGCCAGCTTTCCGTACAGCGTGACGCGGTG 7420 Query 11344 CCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGC 11403 ||| || |||||||| | ||||| |||||||||||||| |||| | || ||||| Sbjct 7419 CCATTCTGTGCGCTCTTTCTGCTCACCGGTCTGCTTGTCGCGCCAGGTATCTGACGTGGC 7360 Query 11404 CAGACTGAGG 11413 |||| | ||| Sbjct 7359 CAGAGTCAGG 7350 >seq2452 Length=2364 Score = 104 bits (114), Expect = 1e-17 Identities = 225/337 (67%), Gaps = 0/337 (0%) Strand=Plus/Minus Query 11160 GCTTGCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGT 11219 |||| ||||| |||| ||||| ||| || ||||| ||||| || || |||| Sbjct 2205 GCTTACCGCCAAGCATCTGCATTGATCCGCCAATATCGACAACTACTTCCGTTGTGTATC 2146 Query 11220 GGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCT 11279 ||| || || |||| | |||||||| | ||||| | ||| ||||| || |||| Sbjct 2145 TGTCTTGCCCTGACTGGTCTTGCCACTTCCTTGTGCGCAATTGGCCCTCGATATATACCT 2086 Query 11280 GGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCC 11339 | || ||||| || || |||| | || | || |||| | || | ||| ||| | Sbjct 2085 GCGAACCCTTGCGTAGATATTCACCAGCCACCTCTGCCAACTTTCCGTACAGCGTGACGC 2026 Query 11340 GGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAG 11399 | ||||| || |||||||||| ||||| || |||||||||||| |||| || || Sbjct 2025 GATGCCATTCCGTGCGCTCCTTCTGCTCTCCAGTCTGCTTGTCTCTCCATGAATCAGAAG 1966 Query 11400 TGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCT 11459 |||| | | | ||| | || ||| ||||| ||| || | | | | || || | Sbjct 1965 TGGCTACAGTCAGGTTTGCCACTGCCCATCCGCTCGGTGTGTAGCGCACTTTGGGGTCTT 1906 Query 11460 GGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCC 11496 | || || || || || || || || ||||| || || Sbjct 1905 GCCCGAGGTGTCCCACGAGAATCACTTTGTTTACGCC 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208489116978688