Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_006633.1 Length=27346 Score E Sequences producing significant alignments: (Bits) Value seq1563 80.6 5e-11 >seq1563 Length=76377 Score = 80.6 bits (88), Expect = 5e-11 Identities = 108/144 (75%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 23021 TCGGACTGGGATACGAACCCAGAACCTTCCGAAGACATGTCGGCTACTCTATC-ATTTGA 23079 || ||| |||| ||||||||| ||||||||| || ||||| | |||| | | ||| Sbjct 38508 TCAGACCGGGAATCGAACCCAGGACCTTCCGATTACCAGTCGGGTGCTCTTCCCAGCTGA 38449 Query 23080 GCTATCCGG-TCTATACTAAATTTTCTTTCAC-TTATTCTATATACATTAAGCCACACCG 23137 |||||||| | |||||| | ||| | |||| ||||| | | | ||| |||||||||| Sbjct 38448 GCTATCCGAATATATACTGA-TTTCCATTCAAATTATT-TGTCAATATTGAGCCACACCG 38391 Query 23138 TCCATCTTACGGTTAGCATTTTTA 23161 ||| || ||||| | |||||||| Sbjct 38390 TCCTTCATACGGCAACCATTTTTA 38367 Score = 80.6 bits (88), Expect = 5e-11 Identities = 108/144 (75%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 23021 TCGGACTGGGATACGAACCCAGAACCTTCCGAAGACATGTCGGCTACTCTATC-ATTTGA 23079 || ||| |||| ||||||||| ||||||||| || ||||| | |||| | | ||| Sbjct 38798 TCAGACCGGGAATCGAACCCAGGACCTTCCGATTACCAGTCGGGTGCTCTTCCCAGCTGA 38739 Query 23080 GCTATCCGG-TCTATACTAAATTTTCTTTCAC-TTATTCTATATACATTAAGCCACACCG 23137 |||||||| | |||||| | ||| | |||| ||||| | | | ||| |||||||||| Sbjct 38738 GCTATCCGAATATATACTGA-TTTCCATTCAAATTATT-TGTCAATATTGAGCCACACCG 38681 Query 23138 TCCATCTTACGGTTAGCATTTTTA 23161 ||| || ||||| | |||||||| Sbjct 38680 TCCTTCATACGGCAACCATTTTTA 38657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87384790601856