Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_007023.1
Length=180500
Score E
Sequences producing significant alignments: (Bits) Value
seq2351 280 2e-70
seq2333 170 2e-37
seq3532 149 7e-31
>seq2351
Length=10305
Score = 280 bits (310), Expect = 2e-70
Identities = 558/813 (69%), Gaps = 29/813 (4%)
Strand=Plus/Plus
Query 41602 TTCTCTTACGCTGGCGTACAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCACCAAC 41661
||||||||||||| || |||||||| |||||||||||| |||| | ||| || |
Sbjct 2394 TTCTCTTACGCTGCGGTCAAGCAGTTGGAAGGGAAATATCTGGTGCAAAACCGCGTCACC 2453
Query 41662 GGTGACATCTACGAAACACCGCAATATGCGTTTATGCTGATTGCTATGTGTCTGCA-TCA 41720
|||||||||||||||| | || | | || | | ||| | ||| || ||| ||
Sbjct 2454 GGTGACATCTACGAAAGCGCCCAGTTTCTGTATGTACTGGTGGCTGCCTGCCTGTTCTCC 2513
Query 41721 GGACGAAC-CGCGAACCCTGAGCGCATTTAATCATGTTGTCGATTTCTACAACGCAATTT 41779
|| | |||||| | | | ||| ||| || || ||| |||| ||||
Sbjct 2514 GGTTACCCGCGCGAAACGCGTCTGGATTACGTCAAA----CGCTT-CTATGACGCGATTT 2568
Query 41780 CGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGT 41838
| | | | ||| | || || || ||||| || ||| | || |||||||| || || |||
Sbjct 2569 CT-ACCTTCAAGATTTCATTGCCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGT 2627
Query 41839 CAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTA 41898
||||| | ||||| ||||||| | || || |||| ||| | || ||
Sbjct 2628 CAGTTCAGCTCCTGCGTGTTGATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCC--- 2684
Query 41899 ACCTC---TGCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGA 41955
||||| ||| |||||||| || ||||||| || || |||||||| |||| || ||
Sbjct 2685 ACCTCCAGTGCTATCGTGAAATACGTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGT 2744
Query 41956 CACATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATC 42015
| ||||| || ||||| || || |||||||||||| | ||||| ||| ||
Sbjct 2745 CGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAGCATTCCATACTGGCTGTATT 2804
Query 42016 CCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGT 42075
|| |||| |||||| | ||||| || || |||||||| ||||| || || || || ||
Sbjct 2805 CCTTTCTATAAACATTTCCAGACCGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGC 2864
Query 42076 GGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTG 42135
|| || |||||||||| ||| ||| | |||||| ||||||| |||| ||||||||| |||
Sbjct 2865 GGAGCGGCAACGTTGTTTTACCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTG 2924
Query 42136 AAAAACAACAAAGGTGTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTT 42195
|| |||||| || || || ||||| | |||||||| ||||| ||||| ||| |
Sbjct 2925 AAGAACAACCGTGGCGTGGAAGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTG 2984
Query 42196 AACGATTTGATGTATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCC---CT 42252
||| | |||||||| |||| | |||| | | ||||| |||||||||| ||
Sbjct 2985 AACAAGCTGATGTATCAGCGCCTGGTCAAAGGACAAGAAATCACCCTGTTCAGCCCCTCT 3044
Query 42253 GACGTTGCAAATGATCGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAA 42312
||||| | |||||||||| || || | || || |||||| ||||||||||
Sbjct 3045 GACGTACC------CGGCCTGTATGACGCATT-TTTC--GCCGATCAGGATGAGTTCGAA 3095
Query 42313 GAACTCTAT-ACCAGTTTGGAAAAAGACCCAACGGTACGCAAGAAACGCATTAAAGCAGC 42371
| ||| | |||| | ||||||||| | | ||||||||| ||| ||||| |
Sbjct 3096 CGCTTATATCAGCAGTAT-GAAAAAGACGACAGCATCCGCAAGAAATCCATGAAAGCGGT 3154
Query 42372 AGACTTATTCCAGTTGCTTGTTCAGGAACGCGC 42404
|| | ||| | || | | || ||||||||
Sbjct 3155 CGATCTGTTCTCGCTGATGATGCAAGAACGCGC 3187
Score = 129 bits (142), Expect = 7e-25
Identities = 360/539 (67%), Gaps = 24/539 (4%)
Strand=Plus/Plus
Query 44086 CTTTATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATTCGTTTCTATGTCTCGTTT 44145
||||||||||| || |||||||| |||||||| || ||||| |||||| ||
Sbjct 4919 CTTTATCTGTGCCTGATGAGCGTCAACGCGCTGGAAGCCATCCGTTTTTATGTCAGTTTC 4978
Query 44146 ACCTTTACGTTCAACTTTGCCGAACAGGGCAAGATGGAAGGTAACGCAAAGATCATGCGT 44205
||| | ||| ||||||||||| | |||||| || ||||| || || ||
Sbjct 4979 GCCTGCTCATTCGCCTTTGCCGAACGCGAACTGATGGAGGGCAACGCCAAAATTATCAAA 5038
Query 44206 CTGATTGCCCGTGATGAAGCACTTCATCAGAAAGGTACTCAAAGCAAGATCCGACTCTG- 44264
||||| ||||| |||||||| || || | || ||||| || ||| | || ||||
Sbjct 5039 CTGATCGCCCGCGATGAAGCGCTGCACCTGACCGGTACCCA--GCATATGCTGAATCTGA 5096
Query 44265 -GCAGATGGGTAAAGATGACCCAGAAATGGCAGAAATCGCGTATCAGTACGAAGAAGAA- 44322
|| || | || || || ||||||||| ||||||| | || | || | |||
Sbjct 5097 TGCGTTCCGGCCAGGACGATCCGGAAATGGCACAAATCGCCGAAGCGTGCCAACAGGAAT 5156
Query 44323 GCAACA--CAGATTTTCCTCGAAGTTTACGAGCAGGAAAAAGAATGGGCTGAACACTTAT 44380
|| || | | || | || | | || ||||||| ||||| ||||| ||| || | |
Sbjct 5157 GCTACGACCTGTTTGTGCTGGCTGC--AC-AGCAGGAGAAAGAGTGGGCGGAATACCTGT 5213
Query 44381 TCAGTATTGGT--GATGTTGACGGCGTGACACTGAAAAGTACAATC---GCCTATA--TC 44433
|| | ||| |||| | ||| ||| || |||| ||| || ||| || |
Sbjct 5214 TCCGCGACGGTTCGATGATT--GGCCTGA-AC---AAAG-ACATTCTCTGCCAGTACGTT 5266
Query 44434 GAACACTTAACCGACCAACGTATGCGAGCGGTTGGGTTACAGTCTCCGTTTAAACCGAGT 44493
||| || | ||| | || |||| |||||| ||| | | | ||||| || || |
Sbjct 5267 GAATACATCACCAATATCCGCATGCAAGCGGTAGGGCTGCCCTTGCCGTTCCAAACGCGC 5326
Query 44494 CCTAACCCGTATCCGTGGATGAACAAATGGTTGAAGTCTGACAACGTTCAGGTAGCCCCG 44553
|||||||| |||||||| || ||| || ||||||||||| ||||| || |||
Sbjct 5327 ACTAACCCGATCCCGTGGATTAATGCCTGGCTGGTCTCTGACAACGTGCAGGTTGCTCCG 5386
Query 44554 CAAGAGGTTGAAGTAAGTTCTTACCTGGTTGGCAACCTCAACACCGAGATCAGCGACGA 44612
||||| || ||||| |||||||| ||||| ||| | | | | ||||||| || |||
Sbjct 5387 CAAGAAGTGGAAGTGAGTTCTTATCTGGTCGGCCAAATTGATTCTGAGATCAACGCCGA 5445
Score = 123 bits (136), Expect = 3e-23
Identities = 289/434 (67%), Gaps = 8/434 (2%)
Strand=Plus/Plus
Query 42953 ATTGCGATTGGGAATGGTTGCGCGGCGAAATCAAAAAATATGGCTTGCGTAACTCAACTC 43012
||| |||||||||| |||||| | ||||||| | | || | |||||||| || |
Sbjct 3754 ATTACGATTGGGAAGCACTGCGCGACAGTATCAAAACACACGGTCTACGTAACTCCACGC 3813
Query 43013 TTTCCGCTTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTG 43072
| || || || ||||| | || | || ||| | |||| | || ||||| || |
Sbjct 3814 TCTCTGCGTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCG 3873
Query 43073 AACCGCCTCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGTTCATTCAACCAGGTAG 43132
|||| || ||||||| | ||| | || | || ||||| || || |||||| |
Sbjct 3874 AACCACCACGCGGTCACATCAGTATCAAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGG 3933
Query 43133 TACCGAACCAGAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCG 43192
| ||| | | | | || ||| ||| || | || ||| |||| | ||
Sbjct 3934 TGCCGGATTACGAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAAC---- 3989
Query 43193 GTAATAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCT 43252
||| | || || ||| | |||| | |||||||||||||| ||||| || || |
Sbjct 3990 --AATGACGGCTACCTGCAACTGGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTT 4047
Query 43253 CTGCAAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAACCA 43312
|||| ||||||||||| |||||||| |||||| || |||||| ||||||
Sbjct 4048 CTGCCAACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTG-CCGATGAAACAG 4106
Query 43313 TCATTGA-TGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCACAAC 43371
| ||| |||| ||||| || | | | ||| ||||||| ||||||||||| |||
Sbjct 4107 TTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAAC 4166
Query 43372 ACCCGCGACGGTGC 43385
||||| ||||||||
Sbjct 4167 ACCCGTGACGGTGC 4180
>seq2333
Length=8475
Score = 170 bits (188), Expect = 2e-37
Identities = 786/1226 (64%), Gaps = 72/1226 (6%)
Strand=Plus/Minus
Query 155619 GCCCGTGCATACATCGAATATCGTCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 155678
|| ||| | ||||| || || ||||||||||| ||| | ||||| ||||| | |
Sbjct 5737 GCACGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACA----ACGCGG 5682
Query 155679 CTGTTCAAA----GATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGA 155734
| ||| || || || ||| |||| | | | ||||| | | ||||||
Sbjct 5681 CCGTTTGAATCAGGAAATTCGTGGTCTGGTTGAACAGAGCAACATGGCCCTGCTCAACGA 5622
Query 155735 GAACGCGAACAAACACGCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGGTATTGT 155794
|||||| |||||| || | ||| |||| || |||||| | ||||||| ||||| ||
Sbjct 5621 GAACGCCAACAAAGACAGTAAAGTAATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGT 5562
Query 155795 AGCGAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTC 155854
|| ||||| | |||| | |||||||| ||| | | || || |||||
Sbjct 5561 TGCCAAGCACTACGCCAAGCAACATATCCTGCCGCGCGACGTGGTGCTTGCTCATGAACG 5502
Query 155855 CGGCGACATCCACTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGCT 155913
||| || || ||||| || |||||||| ||| ||||||| | | || | |||||
Sbjct 5501 CGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTC-AACTGTA 5443
Query 155914 GTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCG 155973
||| | || | |||| ||| || | || || ||||||||||||||||| || || |
Sbjct 5442 TGCTGATCGACCTTGAAGGCATGTTGACCAAGGGGTTCAAGATGGGTAACGCGGAGATTG 5383
Query 155974 AACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTG 156033
| || || ||||| ||| ||||| || | | ||| || |||| ||| ||| | |
Sbjct 5382 AGCCACCAAAATCCATCTCAACCGCGACAGCAGTGACGGCCCAAATCATCGCGCAGGTGG 5323
Query 156034 CTTCTCACCAGTACGGCGGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGCTCCGTA 156091
| ||| |||||||| || ||| || || || | ||| || | ||||| ||||
Sbjct 5322 CAAGCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGGCACCGTT 5265
Query 156092 TG---CAGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTT 156148
| | | | | | || ||||||| | |||| | ||| | ||| |
Sbjct 5264 CGTCACCGCCA-GCCTTA--AAAAGCACCGGGAAACTGCTGATGAGTGGCACATTCC--- 5211
Query 156149 AGAT-CGTA--CATATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAAT 156204
||| || | | ||||| || || |||||||| ||| | || || ||||| |
Sbjct 5210 CGATGCGGACGCCTATGCACTGTCTCGTACCGAAAAAGA-GTGCTACGACGCCTTCCAGT 5152
Query 156205 CGTATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTA 156264
|| ||||| ||||| || |||||||| || ||||| || || ||||| || || ||
Sbjct 5151 CGCTGGAATATGAAGTAAATACGCTGCACACCGCCAATGGTCAGACACCGTTTGTCACCT 5092
Query 156265 TTACTTTCGGTACTGGTAC-----GGGAATGTTTGAACGGATGATCCAGAAAGCTATTCT 156319
|| ||||||| || || |||||| || |||| ||| || | || ||
Sbjct 5091 TTGGTTTCGGTCTCGGCACCCGTTGGGAAT-----CGCGCCTGATTCAGCAATCCATCCT 5037
Query 156320 GAAAAACCGTATCCGTGGCCTGGGTAAAAAAGGTATTACTCCGGTATTCCCTAAACTGGT 156379
| ||||| || || ||||| ||||| ||| || |||| ||||| |||||||
Sbjct 5036 GCGCAACCGCATTGCCGGTCTGGGCAAAAACCGTAAAACCGCGGTGTTCCCCAAACTGG- 4978
Query 156380 TATGTTC---ATGGAAAAAGGCATTAACCTTGATCCAGAGGATCGCAACTATGACATCAA 156436
||||| || | || | || | | | | |||| ||||||||||||||
Sbjct 4977 --TGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAA 4920
Query 156437 ACAACTGGCTCTGGAATGCGCTTCAAAACGTATGTACCCAGATATCATTAGTGCATATAA 156496
|||||||| ||||| ||||| || || |||||||| ||||| | | | || |
Sbjct 4919 GCAACTGGCACTGGATTGCGCCAGCAAGCGGATGTACCCGGATATTCTCAAT---TACGA 4863
Query 156497 TAACCGTCGCATCACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGCAGTTTC 156554
| | || | | | |||| | | || | || | |||||||| || |||||||||
Sbjct 4862 TCA-GGTGG--TTA-AGGTTACCG-GCTCGTTTAAGACGCCTATGGGCTGCCGCAGTTTC 4808
Query 156555 CTTAGTGTGTGGCATGATGATAACGGTAATGAAGTTCTGGATGGACGTAATAACCTGGGT 156614
||| | |||| |||| || | || || | | | ||||| || || ||||| ||
Sbjct 4807 CTTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAACCTCGGG 4751
Query 156615 GTGGTGACAATCAACCTCCCGCGTATTGCTCTTGAAGCACAATCGCAGGAAGATGAAGAC 156674
|| | | ||||||| ||||| || || || |||||| ||| || | ||
Sbjct 4750 GTAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCA---------GAACATAACGAA 4700
Query 156675 GCACATGACGCATTCTGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTGAAGCCCTG 156734
| | | |||||| | | ||| | |||||| ||||| |||| ||
Sbjct 4699 GAGCGT------TTCTGGAACCTGTTGGATAATCGTCTGCAACTGGCGAAAAAAGCGTTG 4646
Query 156735 ATGACTCGCATCGATAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGATCCTGTACACG 156794
||||| |||||||| | | || |||||| |||| || || |||||||| | |
Sbjct 4645 ATGACGCGCATCGAGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCAATCCTGTATATG 4586
Query 156795 GAAGGTGCATTCGGTGTTCGTCTGAA 156820
||||| || | ||||| || |||||
Sbjct 4585 GAAGGCGCCTGTGGTGTACGCCTGAA 4560
>seq3532
Length=11862
Score = 149 bits (164), Expect = 7e-31
Identities = 145/187 (78%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979
|| ||||| || || ||||| |||||||| || || || || ||||| |||||||||||
Sbjct 11335 GTGGAAGGGGGGCAACACCTGAACGTGAACGTTCTGCGCCGTGAAACGCTGGAAGATGCG 11276
Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039
|| ||||| || || || ||||| ||||| || ||||| ||||| ||||||||||| ||
Sbjct 11275 GTAAAACACCCGGAAAAATACCCGCAGTTGACCATCCGTGTTTCTGGTTATGCAGTGCGT 11216
Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAGC 52099
|| || || |||| |||||||| || || ||||| || | | || || || ||||||
Sbjct 11215 TTCAACTCATTGACCCCAGAACAGCAACGTGACGTGATTACGCGTACTTTCACTGAAAGC 11156
Query 52100 ATGTAAT 52106
||||||
Sbjct 11155 CTGTAAT 11149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577443357388800
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