Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq14 136 1e-26
>seq14
Length=2234412
Score = 136 bits (150), Expect = 1e-26
Identities = 804/1277 (63%), Gaps = 46/1277 (4%)
Strand=Plus/Plus
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
||| ||||||||||||| || |||||||| || ||||| || || ||| | | ||
Sbjct 775233 CACAGGAAAAGAGGAATACCGAGCACGTGAGCTATTCTACGCCCTGTGGATACCCGATTT 775292
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|| ||||| || || ||||| ||| || | ||||| ||||| |||||
Sbjct 775293 GTTCATGAAACGTGTCCTGGCAGACGGTCCCTGGAGTCTGATGTGCCCCCACGAGTGTCC 775352
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
||| || | || |||||||| || | | | || ||| |||||| || |||
Sbjct 775353 AGGCCTCTGTGACACTTGGGGTGAGGAATTCGATAAGCTGTACACAAAGTACGA---GGA 775409
Query 364086 GGGAAAGGCTCGTAA-----GACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|| |||||||| | | ||| | || || | | |||| ||| || || |
Sbjct 775410 GG---AGGCTCGTTACAAGCGTCAAGTGCCAGCCCGGGAGCTGTGGACAGCAATTCTAAT 775466
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
|| || ||||||| ||||| ||||| ||| ||||||| ||| | |||||| | || ||
Sbjct 775467 GTCACAAGTTGAGACTGGAACTCCCTACATGCTGTACAAGGATGCCTGCAACAGGAAATC 775526
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259
||| ||| || ||||||| ||||| | |||||| | || |||||||| |||| ||
Sbjct 775527 CAATCAGAAGAACCTTGGAACAATAAAATGCAGCAACTTGTGCACCGAGATCGTTGAGTA 775586
Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
| | ||||| || ||| || || || | || ||||| || | ||||||
Sbjct 775587 CTCGAGCCCCGATGAAGTTGCTGTCTGCAATTTGGCATCGATAGCAGTCAACATGTTTGT 775646
Query 364320 --------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGAC-GTAACCTATCATGC 364370
|||| | || | |||| | | || | | ||| || | | ||
Sbjct 775647 GGATCCAGTGAAGAAG--ACCTATGACTTCGA-CAAACTCAAGACAGTCGTCAAAGTTGT 775703
Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCG 364430
|| | |||||||||| ||| |||||| ||||| |||||| || | || | || |
Sbjct 775704 CACCAGAAATCTCGACAGGGTCATCGACGTCAATTACTATCCAGTT-GAGGAGGCAAGAG 775762
Query 364431 T-TCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTTTT 364487
| || || ||| | || || || || || |||| || ||||| || || || | ||
Sbjct 775763 TCTCCAACATGAGACACCGTCCCATGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTCC 775822
Query 364488 TA-TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546
|| |||||| | |||| || ||| || | || || | ||||||
Sbjct 775823 TACTGATGCGTTA---TCCATTCGACAGTGATGAGGCCCAGAAACTCAACATCCAGATCT 775879
Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAA 364606
| || || | || | || || || || || ||||| | || || ||||| |
Sbjct 775880 TCGAGACCCTCTACTATGGTGCCCTGGAGGCATCCTGTGAACTCGCCCAAGAGAAGGGTA 775939
Query 364607 AGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGA 364666
||| || || | || || || | ||||| | |||||| || | |||
Sbjct 775940 CTTACGAGACGTACAAAGGCTCGCCAGTCAGCCAGGGCATCCTCCAGTACGACATGTGGG 775999
Query 364667 ATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA------ 364720
|||||| || | || ||| |||||| || || ||| | || |
Sbjct 776000 GTGTCACACCGACAAACCTCTGGGACTGGGCTAAACT------CAAGGAGAAAATATCTC 776053
Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAG-CGCCCATGCCCACGGCTTCTACTGCACAG 364779
| || || | ||||| || | ||| | | || ||||| || || || || || |||
Sbjct 776054 AACACGGGGTCAGGAACTCTCT-GCTACTGGCACCAATGCCAACAGCATCAACAGCCCAG 776112
Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839
||||| || ||||||||| | |||| || | || ||||| | || || | || ||
Sbjct 776113 ATCCTGGGTAACAACGAGGCCATCGAGCCCTACACCAGCAACATCTACTCCAGGCGTGTG 776172
Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899
|| || || ||||||| ||| || ||| | || | | ||| || | || |||
Sbjct 776173 CTGTCTGGTGAATTTCAGGTCGTCAATCCCCATCTGCTGAGGGACCTCACTGATCGCAAT 776232
Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959
|| |||| || ||||||||| || || || |||||| || | |||| |||
Sbjct 776233 CTCTGGGACGATCACATGAAGAATCTGATAATAGCGAATAATGGGTCAATTCAGAGTATT 776292
Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA 365019
| | | |||| ||| || ||| | | |||| ||| || ||||| ||| || | |
Sbjct 776293 GAGGAAATACCAGCAGACCTCAAGGCACTCTACAGAACAGTCTGGGAGATTCCCCAGAGG 776352
Query 365020 ACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079
| || | | ||||| || |||||||| |||||| || |||| ||||| | ||
Sbjct 776353 ATGATCCTCAAAATGGCTGCTGATCGCGGGGCTTTTGTCGATCAGTCACAGTCACTCAAT 776412
Query 365080 GTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139
|| |||| | | |||||| | | || || || ||||||||||||| ||| ||| ||
Sbjct 776413 GTTCACATGGCCAATCCAACCACTGAGAAACTCACGTCCATGCATTTCTTCGGTTGGGAA 776472
Query 365140 TCCGGTCTTAAGACAGG 365156
| || | ||||| ||
Sbjct 776473 GCTGGATTGAAGACTGG 776489
Score = 123 bits (136), Expect = 6e-23
Identities = 276/409 (67%), Gaps = 4/409 (1%)
Strand=Plus/Plus
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| || ||||| || || || || || |||||||| || ||||||||| | |||| ||
Sbjct 232530 GCACCAATGCCAACAGCATCAACAGCCCAGATCCTGGGTAACAACGAGGCCATCGAGCCC 232589
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
| || ||||| | || || | || || || || || ||||| | ||| || |||
Sbjct 232590 TACACCAGCAACATCTACTCCAGGCGCGTGCTGTCTGGTGAATTCCAGGTCGTCAATCCC 232649
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| || | ||||| || | || |||| || |||| ||| ||||||||| ||
Sbjct 232650 CATCTCCTGAAGGACCTCACTGAACGCGATCTCTGGGACGACGACATGAAGAATCTGATA 232709
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT-CCAGAAGATCTGAAGCCTAT 364988
|| || ||||| || | |||| || | || | | |||| ||| | ||| | |
Sbjct 232710 ATAGCGAACAATGGGTCGATCCAGAGTAT-CGAGAAAATACCAGCAGACATCAAGGCACT 232768
Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048
|||| ||| || ||||| ||| || | | | || | | ||||| || ||||| ||
Sbjct 232769 GTACAGAACAGTCTGGGAGATTCCCCAGAGGATGATCCTGAAAATGGCTGCTGATCGAGG 232828
Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG-CCAACCTCCGCCA 365107
||||||||| |||| ||||||| || || |||| | ||| |||||| | | |
Sbjct 232829 GGCTTTTATCGATCAGTCCCAGTCGACCAATGTTCACATGGC-CAGTCCAACCCCTGAGA 232887
Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||| || ||||||||||||| ||| ||| || | || | ||||| ||
Sbjct 232888 AGCTCACGTCCATGCATTTCTTCGGTTGGGAAGCTGGATTGAAGACTGG 232936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303287337502976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |