Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 136 1e-26 >seq14 Length=2234412 Score = 136 bits (150), Expect = 1e-26 Identities = 804/1277 (63%), Gaps = 46/1277 (4%) Strand=Plus/Plus Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 ||| ||||||||||||| || |||||||| || ||||| || || ||| | | || Sbjct 775233 CACAGGAAAAGAGGAATACCGAGCACGTGAGCTATTCTACGCCCTGTGGATACCCGATTT 775292 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 || ||||| || || ||||| ||| || | ||||| ||||| ||||| Sbjct 775293 GTTCATGAAACGTGTCCTGGCAGACGGTCCCTGGAGTCTGATGTGCCCCCACGAGTGTCC 775352 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 ||| || | || |||||||| || | | | || ||| |||||| || ||| Sbjct 775353 AGGCCTCTGTGACACTTGGGGTGAGGAATTCGATAAGCTGTACACAAAGTACGA---GGA 775409 Query 364086 GGGAAAGGCTCGTAA-----GACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 || |||||||| | | ||| | || || | | |||| ||| || || | Sbjct 775410 GG---AGGCTCGTTACAAGCGTCAAGTGCCAGCCCGGGAGCTGTGGACAGCAATTCTAAT 775466 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 || || ||||||| ||||| ||||| ||| ||||||| ||| | |||||| | || || Sbjct 775467 GTCACAAGTTGAGACTGGAACTCCCTACATGCTGTACAAGGATGCCTGCAACAGGAAATC 775526 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 ||| ||| || ||||||| ||||| | |||||| | || |||||||| |||| || Sbjct 775527 CAATCAGAAGAACCTTGGAACAATAAAATGCAGCAACTTGTGCACCGAGATCGTTGAGTA 775586 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | | ||||| || ||| || || || | || ||||| || | |||||| Sbjct 775587 CTCGAGCCCCGATGAAGTTGCTGTCTGCAATTTGGCATCGATAGCAGTCAACATGTTTGT 775646 Query 364320 --------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGAC-GTAACCTATCATGC 364370 |||| | || | |||| | | || | | ||| || | | || Sbjct 775647 GGATCCAGTGAAGAAG--ACCTATGACTTCGA-CAAACTCAAGACAGTCGTCAAAGTTGT 775703 Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCG 364430 || | |||||||||| ||| |||||| ||||| |||||| || | || | || | Sbjct 775704 CACCAGAAATCTCGACAGGGTCATCGACGTCAATTACTATCCAGTT-GAGGAGGCAAGAG 775762 Query 364431 T-TCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTTTT 364487 | || || ||| | || || || || || |||| || ||||| || || || | || Sbjct 775763 TCTCCAACATGAGACACCGTCCCATGGGAATTGGAGTTCAGGGTCTGGCAGATGCATTCC 775822 Query 364488 TA-TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546 || |||||| | |||| || ||| || | || || | |||||| Sbjct 775823 TACTGATGCGTTA---TCCATTCGACAGTGATGAGGCCCAGAAACTCAACATCCAGATCT 775879 Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAA 364606 | || || | || | || || || || || ||||| | || || ||||| | Sbjct 775880 TCGAGACCCTCTACTATGGTGCCCTGGAGGCATCCTGTGAACTCGCCCAAGAGAAGGGTA 775939 Query 364607 AGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGA 364666 ||| || || | || || || | ||||| | |||||| || | ||| Sbjct 775940 CTTACGAGACGTACAAAGGCTCGCCAGTCAGCCAGGGCATCCTCCAGTACGACATGTGGG 775999 Query 364667 ATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA------ 364720 |||||| || | || ||| |||||| || || ||| | || | Sbjct 776000 GTGTCACACCGACAAACCTCTGGGACTGGGCTAAACT------CAAGGAGAAAATATCTC 776053 Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAG-CGCCCATGCCCACGGCTTCTACTGCACAG 364779 | || || | ||||| || | ||| | | || ||||| || || || || || ||| Sbjct 776054 AACACGGGGTCAGGAACTCTCT-GCTACTGGCACCAATGCCAACAGCATCAACAGCCCAG 776112 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 ||||| || ||||||||| | |||| || | || ||||| | || || | || || Sbjct 776113 ATCCTGGGTAACAACGAGGCCATCGAGCCCTACACCAGCAACATCTACTCCAGGCGTGTG 776172 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 || || || ||||||| ||| || ||| | || | | ||| || | || ||| Sbjct 776173 CTGTCTGGTGAATTTCAGGTCGTCAATCCCCATCTGCTGAGGGACCTCACTGATCGCAAT 776232 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 || |||| || ||||||||| || || || |||||| || | |||| ||| Sbjct 776233 CTCTGGGACGATCACATGAAGAATCTGATAATAGCGAATAATGGGTCAATTCAGAGTATT 776292 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA 365019 | | | |||| ||| || ||| | | |||| ||| || ||||| ||| || | | Sbjct 776293 GAGGAAATACCAGCAGACCTCAAGGCACTCTACAGAACAGTCTGGGAGATTCCCCAGAGG 776352 Query 365020 ACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 | || | | ||||| || |||||||| |||||| || |||| ||||| | || Sbjct 776353 ATGATCCTCAAAATGGCTGCTGATCGCGGGGCTTTTGTCGATCAGTCACAGTCACTCAAT 776412 Query 365080 GTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 || |||| | | |||||| | | || || || ||||||||||||| ||| ||| || Sbjct 776413 GTTCACATGGCCAATCCAACCACTGAGAAACTCACGTCCATGCATTTCTTCGGTTGGGAA 776472 Query 365140 TCCGGTCTTAAGACAGG 365156 | || | ||||| || Sbjct 776473 GCTGGATTGAAGACTGG 776489 Score = 123 bits (136), Expect = 6e-23 Identities = 276/409 (67%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || || || || || |||||||| || ||||||||| | |||| || Sbjct 232530 GCACCAATGCCAACAGCATCAACAGCCCAGATCCTGGGTAACAACGAGGCCATCGAGCCC 232589 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || | || || || || || ||||| | ||| || ||| Sbjct 232590 TACACCAGCAACATCTACTCCAGGCGCGTGCTGTCTGGTGAATTCCAGGTCGTCAATCCC 232649 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || | ||||| || | || |||| || |||| ||| ||||||||| || Sbjct 232650 CATCTCCTGAAGGACCTCACTGAACGCGATCTCTGGGACGACGACATGAAGAATCTGATA 232709 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT-CCAGAAGATCTGAAGCCTAT 364988 || || ||||| || | |||| || | || | | |||| ||| | ||| | | Sbjct 232710 ATAGCGAACAATGGGTCGATCCAGAGTAT-CGAGAAAATACCAGCAGACATCAAGGCACT 232768 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 |||| ||| || ||||| ||| || | | | || | | ||||| || ||||| || Sbjct 232769 GTACAGAACAGTCTGGGAGATTCCCCAGAGGATGATCCTGAAAATGGCTGCTGATCGAGG 232828 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG-CCAACCTCCGCCA 365107 ||||||||| |||| ||||||| || || |||| | ||| |||||| | | | Sbjct 232829 GGCTTTTATCGATCAGTCCCAGTCGACCAATGTTCACATGGC-CAGTCCAACCCCTGAGA 232887 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| || ||||||||||||| ||| ||| || | || | ||||| || Sbjct 232888 AGCTCACGTCCATGCATTTCTTCGGTTGGGAAGCTGGATTGAAGACTGG 232936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303287337502976