Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 1e-14 seq676 93.3 4e-14 >seq10 Length=2352850 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || |||||||| | || ||| | || ||||||||| Sbjct 819663 ATGCAGATCTTCGTGAAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCT 819722 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||||| |||||||| || || ||||| || || Sbjct 819723 GACACAATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 819782 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | ||||| | || || ||||| | ||||||| | ||| | || || || ||| Sbjct 819783 CAACGTCTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGAACCCTCTCAGACTACAAC 819842 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 819843 ATTCAAAAGGAATCCAC 819859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| ||||||| || | || || ||||||| |||||| Sbjct 821030 AATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACCATCACACTCGAAGTAGAGGCCTC 821089 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | ||||| || || ||||| || ||||| ||||| ||||| Sbjct 821090 TGACACAATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCTCCAGATCA 821149 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | |||| | | || || ||||| ||||||| |||| | ||| || || Sbjct 821150 ACAGCGTTTGATCTTTGCTGGTAAACAACTGGAAGATGGTAGAACTTTGTCCGACTACAA 821209 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || |||||||||||| | || || || Sbjct 821210 CATCCAGAAAGAATCTACACTCCACTTGGT 821239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| || ||||| || | || || | ||||| ||||| Sbjct 820118 AATGCAGATTTTCGTGAAAACTTTGACTGGTAAGACTATCACACTTGAAGTGGAGGCATC 820177 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | ||||| ||||| ||||| || ||||| || || || || Sbjct 820178 TGACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 820237 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTAT 24167 ||| | |||| | || || || ||||| ||||||| ||||| ||||| | || Sbjct 820238 GCAGCGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCAGAACTCTGTCAG--ACTAC 820295 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || |||||||| ||| | || || || | | ||||||||||| Sbjct 820296 AACATCCAGAAAGAATCAACACTCCACTTGGTCCTGCGTCTGAGAGGAGGA 820346 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||||| ||||| ||| | || ||| | |||||||| || Sbjct 819890 AATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATC 819949 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| || ||| || |||||||| || || || ||||| Sbjct 819950 TGACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCA 820009 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | |||| | || || || ||| | || || | |||| | || || || Sbjct 820010 ACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAA 820069 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||||||||| || || Sbjct 820070 CATTCAAAAAGAGTCCAC 820087 >seq676 Length=265522 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || ||| |||| ||||||||| | Sbjct 177642 ATGCAAATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTCGAGGCCTCC 177583 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || || || || || || || || || ||||| || Sbjct 177582 GACACCATCGAGAATGTGAAGGCTAAAATCCAGGATAAGGAGGGAATTCCCCCCGACCAG 177523 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | || || ||||| || || |||| | | | ||||| ||| Sbjct 177522 CAGAGACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAAC 177463 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| || |||||||| |||| || || Sbjct 177462 ATTCAGAAGGAATCTACCCTTCACTTGGT 177434 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || ||| |||| ||||||||| | Sbjct 178098 ATGCAAATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTCGAGGCCTCC 178039 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| || || || || || || || || || Sbjct 178038 GACACCATCGAGAATGTGAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAG 177979 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || || ||||| || || |||| | | | ||||| ||| Sbjct 177978 CAGAGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAAC 177919 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| || |||||||| |||| || || Sbjct 177918 ATTCAGAAGGAATCTACCCTTCACTTGGT 177890 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || ||| | || ||||||||| | Sbjct 177870 ATGCAAATATTCGTCAAGACCCTCACAGGAAAGACCATAACCCTTGAGGTCGAGGCCTCC 177811 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || || || ||||| || || || || || || || Sbjct 177810 GACACCATCGAGAATGTGAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 177751 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | || || ||||| || || |||| | | | ||||| ||| Sbjct 177750 CAGAGACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAAC 177691 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || |||||||| |||| || || Sbjct 177690 ATCCAGAAGGAATCTACTCTTCACTTGGT 177662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429915208295040