Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq38 113 5e-20 seq78 109 6e-19 seq20 107 2e-18 >seq38 Length=2624962 Score = 113 bits (124), Expect = 5e-20 Identities = 80/91 (88%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| Sbjct 2488989 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAATGGGAGCGTGG 2489048 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||| | |||||| || || Sbjct 2489049 GTTCGAACCCCACACTTAGCAAATTTTTTTT 2489079 >seq78 Length=1885816 Score = 109 bits (120), Expect = 6e-19 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| Sbjct 33733 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTATGGGAGCGTGG 33674 Query 126327 GTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||| | ||||| Sbjct 33673 GTTCGAACCCCACACTTAGCAAAT 33650 >seq20 Length=2706103 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1161098 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1161039 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1161038 GTTCGAACCCCACACCTAGCAGAATATTTTT 1161008 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1161623 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1161564 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1161563 GTTCGAACCCCACACCTAGCAGAATATTTTT 1161533 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1162148 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1162089 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1162088 GTTCGAACCCCACACCTAGCAGAATATTTTT 1162058 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1162673 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1162614 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1162613 GTTCGAACCCCACACCTAGCAGAATATTTTT 1162583 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1163198 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1163139 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1163138 GTTCGAACCCCACACCTAGCAGAATATTTTT 1163108 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 1163719 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTATGGGAGCGTGG 1163660 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| || | |||| || Sbjct 1163659 GTTCGAACCCCACACCTAGCAGAATATTTTT 1163629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556833179704320