Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq10 203 6e-47 seq676 178 2e-39 seq29 131 3e-25 >seq10 Length=2352850 Score = 203 bits (224), Expect = 6e-47 Identities = 185/231 (80%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||||| ||||| || || | |||| || || ||||||||||| ||||| || ||||| Sbjct 820575 TTCCTCCTCGAAGACG-AAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCA 820517 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 |||||||| |||||||| || ||||| || || ||||| || | | || ||||| || Sbjct 820516 GAGAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 820457 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 |||||||| ||||| || || ||||| |||||||| ||||||||||| | | ||| Sbjct 820456 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCG 820397 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| | |||||| || ||||||||||||||||| ||||||||||||||| Sbjct 820396 ACTTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACGAATATCTGCATT 820346 Score = 150 bits (166), Expect = 3e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||||| ||||| || || | |||| || || ||||||||||| ||||| || ||||| Sbjct 821031 TTCCTCCTCGAAGACG-AAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCA 820973 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 |||||||| |||||||| || || || || || ||||| || | | || ||||| || Sbjct 820972 GAGAGTGTTCTCCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 820913 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||| || || ||||| || ||||| || ||||| || || ||||| | | ||| Sbjct 820912 GGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCT 820853 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| |||||||| || || || | ||||| || || |||||||| Sbjct 820852 ACTTCCAGTGTGATGGTCTTCCCAGTCAATGTCTTTACAAAGATCTGCAT 820803 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | ||| || ||||||||||| || || |||||||| || Sbjct 819661 CCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAA 819602 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || ||||| || || | ||| ||||| || || Sbjct 819601 AGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGG 819542 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || ||||| || ||||| || || ||||| | | || || Sbjct 819541 ATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACC 819482 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| ||||| || | ||||| ||||| |||||||| Sbjct 819481 TCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819435 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| ||||| || | || | || || |||||||||||||| ||||| || || | Sbjct 820119 TTCCTCCTCGAAGACGAAGAACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTG 820060 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || || || || || || || || || ||||| || | | ||||| || |||| Sbjct 820059 AAAGAGTTCTTCCGTCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTG 820000 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||| || |||||||| || || || || || || ||||| | || ||| | Sbjct 819999 GGATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGA 819940 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||| |||||||||||| || || | ||||| || || ||||||||| Sbjct 819939 CTTCCAGGGTGATGGTTTTGCCAGTCAATGTCTTAACAAAAATCTGCATT 819890 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | ||| || ||||||||||| || || |||||||| || Sbjct 819205 CCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAA 819146 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || ||||| || | | ||| ||||| || || Sbjct 819145 AGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGG 819086 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || ||||| || ||||| || || ||||| | | || || Sbjct 819085 ATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACC 819026 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| ||||| || | ||||| ||||| |||||||| Sbjct 819025 TCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 818979 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | ||| || ||||||||||| || || |||||||| || Sbjct 819433 CCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAA 819374 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || ||||| || | | ||| ||||| || || Sbjct 819373 AGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGG 819314 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || ||||| || ||||| || || ||||| | | || || Sbjct 819313 ATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACC 819254 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| ||||| || | ||||| ||||| |||||||| Sbjct 819253 TCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819207 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | ||| || ||||||||||| || || |||||||| || Sbjct 818977 CCACCTCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAA 818918 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || ||||| || || | ||| ||||| || || Sbjct 818917 AGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGG 818858 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || ||||| || ||||| || || ||||| | | || || Sbjct 818857 ATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGCCTCAACC 818798 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || ||||| || || || | ||| || ||||| |||||||| ||| Sbjct 818797 TCCAACGTAATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCATAATG 818747 >seq676 Length=265522 Score = 178 bits (196), Expect = 2e-39 Identities = 182/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 68224 GATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGT 68283 || |||||| ||||| ||||| || | |||||||| || || || || || || |||| Sbjct 177405 GAATTTAATGACCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGT 177464 Query 68284 TATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTT 68343 | ||||| || || || | ||||| || | |||||| || ||||| || ||||| || | Sbjct 177465 TGTAATCAGAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCT 177524 Query 68344 GGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403 ||||||| ||||| || ||||| || || || || ||||| || |||||||||||| | Sbjct 177525 GGTCGGGGGGAATTCCCTCCTTATCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGG 177584 Query 68404 CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || | ||||||||| ||||| ||||||||||||||||| || ||||| Sbjct 177585 AGGCCTCGACCTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 177642 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || || || || || |||||||| ||||| || Sbjct 177644 CCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 177703 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || ||||| || ||||| || ||| Sbjct 177704 AGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 177763 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || || || ||||| || |||||||||||| | | || || Sbjct 177764 ATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACC 177823 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct 177824 TCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAATATTTGCAT 177870 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || || || || || |||||||| ||||| || Sbjct 178100 CCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 178159 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || ||||| || ||||| || ||| Sbjct 178160 AGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 178219 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || || || ||||| || ||| |||||||| | | || || Sbjct 178220 ATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAGGCCTCGACC 178279 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct 178280 TCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 178326 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || || || || || |||||||| ||||| || Sbjct 178328 CCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 178387 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| || || || || ||||| || ||||| || ||||| || ||| Sbjct 178388 AGAGTGCGACCGTCTTCCAATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 178447 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||||||||| ||| ||||||||| || | | || || Sbjct 178448 ATTCCCTCCTTATCCTGGATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCGACC 178507 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||||||||| || ||||| || || || ||||||||||||||| Sbjct 178508 TCGAGGGTGATGGTCTTGCCCGTCAGCGTTTTCACGAATATCTGCATT 178555 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || || || || || || ||||| ||||| || Sbjct 177872 CCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAA 177931 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | ||| || ||||| || ||| Sbjct 177932 AGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGA 177991 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| ||||| || |||||||||||| | | || || Sbjct 177992 ATTCCCTCCTTATCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACC 178051 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||||||||||||||| || ||||| Sbjct 178052 TCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 178098 >seq29 Length=2726036 Score = 131 bits (144), Expect = 3e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || ||||| || | ||||| ||||| || || || ||||| || Sbjct 1034236 TTCTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCTAATTGTTTTCCAGCGAAGATC 1034177 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||| || |||||||| ||||| || |||||||| || ||||| ||| Sbjct 1034176 AACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGAATCTTGGCTTTGACATTTTCG 1034117 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 || || || | | || || || | ||||||||| || ||||| | ||||||||||| Sbjct 1034116 ATCGTATCAGAAGCCTCAACCTCAAGGGTGATGGTCTTCCCCGTCAATGTCTTGACGAAA 1034057 Query 68454 ATCTGCATTATG 68465 ||||||||| || Sbjct 1034056 ATCTGCATTGTG 1034045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921576687528960