Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq10 122 7e-23 seq676 109 5e-19 seq14 102 7e-17 >seq10 Length=2352850 Score = 122 bits (134), Expect = 7e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || ||||||||||||||||| || | ||| | || || Sbjct 820100 AACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGAGTTCTTCCGTCCTC 820041 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | ||||||||||||| |||| | ||||||||| || || || || |||||||| || Sbjct 820040 CAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTATCTTG 819981 Query 114293 AATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 ||| ||| | |||| | | ||||| ||||| | | |||||| |||| ||| | |||| Sbjct 819980 AAT-TTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGACTTCCAGGGTGATGGTTT 819922 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| |||| || || |||||||||||||| Sbjct 819921 TGCCAGTCAATGTCTTAACAAAAATCTGCAT 819891 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | ||||||||||| || |||||||| ||| || ||| | | |||||| Sbjct 821240 AACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTC 821181 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||||||||||| |||| | ||||||||| || ||||||||||| || ||||| Sbjct 821180 CAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGAATGCCCTCCTTGTCCTG 821121 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 || || || | | ||||| ||||| | || || || || | || | || || Sbjct 821120 GATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTT 821061 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || ||||| || ||||||||||| Sbjct 821060 GCCAGTTAGGGTTTTGACGAAAATCTGCAT 821031 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| || | ||| | |||||| | |||||||||| Sbjct 820771 GTGGATTCCTTCTGGATGTTGTAGTCTGAGAGAGTCCTGCCATCTTCCAATTGTTTACCA 820712 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||| |||||||| |||||||| || ||||| || ||||| || Sbjct 820711 GCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCTTTATCCTGGATCTTCGCCTTG 820652 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||||| | || || || || | || | || ||||| |||||||| Sbjct 820651 ACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTTGCCAGTCAGAGTC 820592 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 820591 TTGACAAAAATCTGCAT 820575 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | || ||||| |||||||||||||| || Sbjct 819892 ATTCCACCACGAAGACGTAGGACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCT 819833 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| | || ||||||||| |||| ||||| || ||||| ||| Sbjct 819832 GAGAGGGTTCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGA 819773 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||| ||| | | ||||| ||||| | || ||| Sbjct 819772 GGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCG 819713 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || |||| || || || || ||||||||| Sbjct 819712 ACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCATG 819662 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || || ||| | |||||| |||||||||||| Sbjct 820315 GTTGATTCTTTCTGGATGTTGTAGTCTGACAGAGTTCTGCCATCTTCCAGTTGTTTACCA 820256 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | |||||| ||||| || |||||||| || ||||| ||||| || Sbjct 820255 GCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 820196 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | | || || || | || | || || || |||| |||| Sbjct 820195 ACGTTCTCAATCGTGTCAGATGCCTCCACTTCAAGTGTGATAGTCTTACCAGTCAAAGTT 820136 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 820135 TTCACGAAAATCTGCAT 820119 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || ||||| || || |||||||| | || | ||| || Sbjct 821012 AACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTC 820953 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | ||||||||||||| |||| | |||||| ||||| || ||||| || |||||||| Sbjct 820952 CAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTG 820893 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| ||| | | ||||| ||||| | || || || |||| || | || || Sbjct 820892 GATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCTACTTCCAGTGTGATGGTCTT 820833 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || |||||||| ||||||||| Sbjct 820832 CCCAGTCAATGTCTTTACAAAGATCTGCATG 820802 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || ||||| || || |||||||| | || | ||| || Sbjct 820556 AACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTC 820497 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | |||||||||||| |||| | |||||| ||||| || |||||||| || || || Sbjct 820496 CAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTG 820437 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | ||| | |||||| | || |||||| || | ||| | ||| || Sbjct 820436 GATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCGACTTCTAGGGTGATCGTCTT 820377 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || || |||||||| Sbjct 820376 TCCCGTGAGGGTCTTCACGAATATCTGCAT 820347 >seq676 Length=265522 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | || || || | |||||||| || || ||||||||||| Sbjct 178325 ATACCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCA 178384 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||||| | |||||| |||||| |||| || | ||| ||||| || Sbjct 178385 GAAAGAGTGCGACCGTCTTCCAATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGG 178444 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || |||||| || | | || | ||| || | || ||| Sbjct 178445 GGAATTCCCTCCTTATCCTGGATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCG 178504 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| ||||| ||||| || || |||||||| Sbjct 178505 ACCTCGAGGGTGATGGTCTTGCCCGTCAGCGTTTTCACGAATATCTGCAT 178554 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | || || || | |||||||| || || ||||||||||| Sbjct 178097 ATACCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCA 178156 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| ||||| || || |||||| |||| || | ||| ||||| || Sbjct 178157 GAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGG 178216 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| || || || | | |||| |||||||| || ||| Sbjct 178217 GGAATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAGGCCTCG 178276 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || || || || || || |||||||| Sbjct 178277 ACCTCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 178326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | || || || | |||||||| || || ||||||||||| Sbjct 177641 ATACCTCCACGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCA 177700 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| ||||| || || |||||| |||| || | ||| ||||| || Sbjct 177701 GAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGG 177760 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| || || || | | || | |||||||| || ||| Sbjct 177761 GGAATTCCCTCCTTGTCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCG 177820 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || || || || || || || ||||| Sbjct 177821 ACCTCAAGGGTTATGGTCTTTCCTGTGAGGGTCTTGACGAATATTTGCAT 177870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | || || || | |||||||| || |||||||||||||| Sbjct 177869 ATACCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCA 177928 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| ||||| || || |||||| |||| | | ||| ||||| || Sbjct 177929 GAAAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGG 177988 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || ||||| || | | || | |||||||| || ||| Sbjct 177989 GGAATTCCCTCCTTATCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCG 178048 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || || || || || || || ||||| Sbjct 178049 ACCTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 178098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||| | || || || | |||||||| || |||||||||||||| Sbjct 177415 ACCTCCACGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGA 177474 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || ||| ||||| || || |||||| |||| || | ||| ||||| || || Sbjct 177475 AAGAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCGGGGGG 177534 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || || || || || || | | || | |||||||| || ||||| Sbjct 177535 AATTCCCTCCTTATCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGAC 177594 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || || || || || || || || ||||| Sbjct 177595 CTCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTGCAT 177642 >seq14 Length=2234412 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||||| ||| | || || || | || ||||| || |||||||||||||| Sbjct 1933625 ACCACCACGTAATCTGAGTACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGA 1933566 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || || ||| || || |||||||||||| | || || | ||| ||||| || || Sbjct 1933565 CAGGGTGCGTCCATCCTCGAGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGG 1933506 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||| || ||||| ||| || ||| | | || | ||||| | | || || Sbjct 1933505 AATGCCCTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCAC 1933446 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || || || || || |||||||| || ||||||||| Sbjct 1933445 CTCGAGGGTGATGGTCTTCCCAGTTAGGGTTTTTACGAAGATCTGCATG 1933397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420114082300416