Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq2694 257 4e-64 seq2969 248 2e-61 >seq2694 Length=15341 Score = 257 bits (284), Expect = 4e-64 Identities = 399/565 (71%), Gaps = 4/565 (1%) Strand=Plus/Minus Query 21029 TGGATGGGTGGCAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAG 21088 ||||| || || || || || ||||| ||||| || | || ||||| ||| Sbjct 2676 TGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCGCTTCCCTACGCATACC 2617 Query 21089 TGCTATGTGGAGCCGTTCTGTGGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAG 21148 ||||| |||||||| || ||||| || || || || |||||||||||| |||| ||| Sbjct 2616 TGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTTTTTATGAAGTCACCGAGCAAA 2557 Query 21149 GTTGAAGTCATCAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCAT 21208 | || || || ||||| | ||| |||| ||||| || || || || ||| || | || Sbjct 2556 GCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTTTATCGGGTGTTGAAACAC 2497 Query 21209 CACCTCGAGGAGTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGT-TCAA 21267 || || || ||||| | |||||||| ||||||||||| ||||||| | ||||| |||| Sbjct 2496 CATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTATCAA 2437 Query 21268 GTGGCTGGACGATACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTA 21327 ||| | || ||||| ||||||||| |||||||| ||||| || || || ||||| Sbjct 2436 -TGGTTAAACATCACGCCGACCGAGACCCTAACCGATATCCAGCGCGCAGCACGTTTCTA 2378 Query 21328 TTACCTGCAGCAGATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCCAC 21387 ||||||||| | || ||||||| |||| | | | | |||||||||| | |||| Sbjct 2377 TTACCTGCAAAAACAGGCGTTCGGCGGCAAGGTGGCGGAGCACACCTTTGGCGTGACCAC 2318 Query 21388 CACTACGCCGCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCACCT 21447 || ||| ||| ||||||||||||||| | || || | || | ||||| || Sbjct 2317 TACAACGGGGCCGCGCCTGAACCTGCTGCGCATGGAAGAAGAGTTATCGCTCGCGCATCT 2258 Query 21448 ACGCCTGAGCCGTGTTTACGTTGAGCACCTGGACT-GGCAGGCGTGCATGGAAAAGTACG 21506 || | || | |||| |||||||| | ||| || || || | || | Sbjct 2257 GCGATTATCACGCACCACCATTGAACACCTGGATTGGGCCAGC-TGTATTGCCCGTTATG 2199 Query 21507 ACCGACCGCACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGGTG 21566 |||| |||||||| ||||||||| |||||| ||||||||| ||||||||||| || | Sbjct 2198 ACCGTCCGCACACGCTGTTTTACTGCGACCCACCGTACTGGGGAACCGAGGGCTATGGCG 2139 Query 21567 TCGACTTCCCCTTCGAGCAATATGA 21591 |||| || | ||||||||||| Sbjct 2138 TCGATTTTGGTCTGGAGCAATATGA 2114 >seq2969 Length=1929 Score = 248 bits (274), Expect = 2e-61 Identities = 397/565 (70%), Gaps = 4/565 (1%) Strand=Plus/Plus Query 21029 TGGATGGGTGGCAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAG 21088 ||||| || || || || || ||||| ||||| || | || | ||||| | ||| Sbjct 200 TGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCACTTCCCGGCGCATATC 259 Query 21089 TGCTATGTGGAGCCGTTCTGTGGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAG 21148 ||||| ||||| ||||| ||||| || || || || || ||||||||| || | |||| Sbjct 260 TGCTACGTGGAACCGTTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTCACCCAGCAAG 319 Query 21149 GTTGAAGTCATCAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCAT 21208 | ||||| || ||||| | ||| |||| ||||| || || || || ||| || | || Sbjct 320 GCGGAAGTGATTAACGATATCAACGGCGAACTGGTCAATCTCTATCGGGTGCTGAAACAC 379 Query 21209 CACCTCGAGGAGTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGT-TCAA 21267 || || || || || | |||||||| ||||||||||| ||||| | | ||||| |||| Sbjct 380 CATCTGGAAGAATTTATACGCCAGTTTAAATGGGCGCTGGTCAGCAGGGCGATGTATCAA 439 Query 21268 GTGGCTGGACGATACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTA 21327 ||| || | || || ||||||| | |||||||| ||||| || ||||| ||||| Sbjct 440 -TGGTTGAAAATCACCCCGACCGAGACCTTAACCGATATCCAGCGCGCGGCCCGTTTCTA 498 Query 21328 TTACCTGCAGCAGATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCCAC 21387 ||||||||| | || ||||||| |||| | ||| | |||||||||| | |||| Sbjct 499 TTACCTGCAAAAACAGGCGTTCGGCGGCAAGGTGGCCGAGCACACCTTTGGCGTGACCAC 558 Query 21388 CACTACGCCGCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCACCT 21447 ||| || ||||| ||||||||| ||||| | || || || ||| || || Sbjct 559 CACCACTGCGCCACGCCTGAACCTGTTGCGCATGGAAGAAGAACTGTCGTTGGCTCATCT 618 Query 21448 ACGCCTGAGCCGTGTTTACGTTGAGCACCTGGACT-GGCAGGCGTGCATGGAAAAGTACG 21506 || || || | | |||| || || |||| |||| || ||||| | || | Sbjct 619 GCGACTATCACGCACCTCCATTGAACAACTTGACTGGGCAAGC-TGCATTGCCCGCTATG 677 Query 21507 ACCGACCGCACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGGTG 21566 |||| |||||||| ||||| ||| |||||||||||| ||| ||| || || || || | Sbjct 678 ACCGTCCGCACACGCTGTTCTACTGCGACCCGCCGTATTGGGGGACGGAAGGTTATGGGG 737 Query 21567 TCGACTTCCCCTTCGAGCAATATGA 21591 | || || | ||||||||||| Sbjct 738 TGGATTTTGGTCTGGAGCAATATGA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122103046233344