Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq14 197 3e-45 seq320 95.1 2e-14 >seq14 Length=2234412 Score = 197 bits (218), Expect = 3e-45 Identities = 635/969 (66%), Gaps = 41/969 (4%) Strand=Plus/Minus Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 || || ||||| || || || ||||||||||| | ||||| ||||||| || ||| Sbjct 232645 TTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTAGGGC 232586 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||||| ||| |||| ||||| ||||| || || || || ||||| || | || Sbjct 232585 TCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGT 232526 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCC 244268 |||||| |||||| || ||||| | ||| || |||| | |||||||| Sbjct 232525 AGCAGAGAGTTCCTGACCCCGTG--TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCC 232468 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | ||| | | ||| || ||| ||||||||||| |||| || | |||| || Sbjct 232467 A-------GAG-GTTTGTCG-GTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGC 232417 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 |||| || ||| | ||| ||| ||| | ||| | ||||| || | |||| Sbjct 232416 TGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATG 232357 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 | || ||||| | ||||||| ||||||||||||| |||| | | |||||| Sbjct 232356 CCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCAT 232297 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | | | ||| || | ||||| | ||| | || ||||| ||||| || || || | Sbjct 232296 CACTGTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTC 232237 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | ||||| | ||||| | |||||||| | || || || || || | ||| ||| Sbjct 232236 CCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGT 232177 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| ||| ||| ||| || | ||||| | |||||| | | || | || Sbjct 232176 CGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGACT---GTCTTGAGTTT---GT 232123 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA-CGCTG 244687 || | || |||| || || | ||| |||| |||||| ||||| || | || || Sbjct 232122 CGAAGTCATAGG--TCTTCTTCACTGG--ATCC--ACAAACATGTTGACTGCTATCGATG 232069 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||| |||||||| || || || || | | | | ||||| || ||||||||||| | | Sbjct 232068 -CCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAG 232010 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||| || || || || |||| || |||||||| || ||||||||| |||||| Sbjct 232009 TTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTG 231950 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTC 244866 || |||||| |||| || ||||| | || | | || | |||| |||| || || Sbjct 231949 TACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTG-TCCACAGCTC 231891 Query 244867 CCTAGC-----CTTGAC-CGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920 | || |||||| | | ||||||| ||| ||||||| |||||||| Sbjct 231890 ACGGGCTGGCACTTGACGCTTGTAACGAGCCT---CCT---CCTCGTACTTTGTGTACAG 231837 Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAG 244980 ||||| || ||||| || ||||| || ||| |||||||| | Sbjct 231836 CTTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAA 231777 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 |||||| ||| | ||||||| | | |||||| | ||||| ||||| ||||| | Sbjct 231776 ACTCCAGGGACCGTCTGCCTTGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTA 231717 Query 245041 GAAGAGGTC 245049 ||| || || Sbjct 231716 GAACAGCTC 231708 Score = 197 bits (218), Expect = 3e-45 Identities = 635/969 (66%), Gaps = 41/969 (4%) Strand=Plus/Minus Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 || || |||||||| || || |||||||| || | ||||| ||||||| || ||| Sbjct 776198 TTGACGACCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGC 776139 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||||| ||| |||| ||||| ||||| || || || || ||||| || | || Sbjct 776138 TCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGT 776079 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCC 244268 |||||| |||||| || ||||| | ||| || |||| | |||||||| Sbjct 776078 AGCAGAGAGTTCCTGACCCCGTG--TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCC 776021 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | ||| | | ||| || ||| ||||||||||| |||| || | |||| || Sbjct 776020 A-------GAG-GTTTGTCG-GTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGC 775970 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 |||| || ||| | ||| ||| ||| | ||| | ||||| || | |||| Sbjct 775969 TGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATG 775910 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 | || ||||| | ||||||| ||||||||||||| |||| | | |||||| Sbjct 775909 CCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCAT 775850 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | | | ||| || | ||||| | ||| | || ||||| ||||| || || || | Sbjct 775849 CACTGTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTC 775790 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | ||||| | ||||| | |||||||| | || || || || || | ||| ||| Sbjct 775789 CCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGT 775730 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| ||| ||| ||| || | ||||| | |||||| | | || | || Sbjct 775729 CGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGACT---GTCTTGAGTTT---GT 775676 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA-CGCTG 244687 || | || |||| || || | ||| |||| |||||| ||||| || | || || Sbjct 775675 CGAAGTCATAGG--TCTTCTTCACTGG--ATCC--ACAAACATGTTGACTGCTATCGATG 775622 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||| |||||||| || || || || | | | | ||||| || ||||||||||| | | Sbjct 775621 -CCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAG 775563 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||| || || || || |||| || |||||||| || ||||||||| |||||| Sbjct 775562 TTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTG 775503 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTC 244866 || |||||| |||| || ||||| | || | | || | |||| |||| || || Sbjct 775502 TACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTG-TCCACAGCTC 775444 Query 244867 CCTAGC-----CTTGAC-CGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920 || || |||||| | | ||||||| ||| ||||||| |||||||| Sbjct 775443 CCGGGCTGGCACTTGACGCTTGTAACGAGCCT---CCT---CCTCGTACTTTGTGTACAG 775390 Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAG 244980 ||||| || ||||| || ||||| || ||| |||||||| || Sbjct 775389 CTTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAG 775330 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 |||||| ||| | || ||| | | |||||| | ||||| ||||| ||||| | Sbjct 775329 ACTCCAGGGACCGTCTGCCAGGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTA 775270 Query 245041 GAAGAGGTC 245049 ||| || || Sbjct 775269 GAATAGCTC 775261 >seq320 Length=265502 Score = 95.1 bits (104), Expect = 2e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| || || |||| | ||||| | |||||| || ||||||| ||||||||| Sbjct 15254 TTCAACGCGATTGAGAATCTCCCCTGTGTAGCGAAGAAAGCTAACTGGGCACTCAACTGG 15313 Query 42672 ATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGG 42730 || | | | || |||||||||| ||| || || | ||||| |||| |||||||| Sbjct 15314 ATTGTAAA-CGAAACTGCAACGTTCGCCGAAAGACTAATCGCCTTCGCCGCTGTCGAGGG 15372 Query 42731 CATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGC 42789 || |||||||| || ||||| ||||||||||| | || || || || |||| Sbjct 15373 AATTTTCTTCTCTGGTAGTTTCGCTGCCATCTTCTGGTTGAAAAAGCGTGGACTC-ATGC 15431 Query 42790 CCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 | || ||||| ||| || || || ||| ||||||||| Sbjct 15432 CTGGTCTCACTTTCAGTAATGAGCTTATCTCCAGGGACGA 15471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944292360775680