Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3127 113 1e-19 >seq3127 Length=15394 Score = 113 bits (124), Expect = 1e-19 Identities = 263/393 (67%), Gaps = 8/393 (2%) Strand=Plus/Minus Query 68418 TCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCT 68477 || ||| | ||||| ||| |||||||||||||| | || | ||||||||||| ||| Sbjct 1892 TCTGAGCTATATGGCTTAGTACAAGAAATTCCTCAAAGAGAGACAACTCCGTTTTACCCT 1833 Query 68478 CGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGAT--CTGTAAAAATTACCGTG 68535 || || |||| || |||||||| || || |||||||| |||| ||| || |||| Sbjct 1832 AGATCTCCATACGCGGTCGCAAAGTTATATGCATATTGGATTACTGT--AAACTATCGTG 1775 Query 68536 AGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAG 68595 |||| ||| || |||| || ||| || ||||||||| || ||| | | Sbjct 1774 AGTCATATGGAATCTATGCTTGTAACGGTATACTTTTCAATCATGAATCTCCACGTCGTG 1715 Query 68596 GCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTTCAATGGTGTCG 68655 | | || || || || ||||| || | | || ||||||| | | || | | Sbjct 1714 GTGAAACTTTTGTAACACGAAAAATTACTCGCGCAATTGCTAATATTTCCCAAGGAATTG 1655 Query 68656 AAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATT 68715 || | ||| | ||| | |||||||| || | | | |||||||| | || || |||| Sbjct 1654 AACAGTGCCTTTATTTAGGTAATATGGACTCTTTACGTGATTGGGGCCACGCAAAAGATT 1595 Query 68716 ACGT--AGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGC 68773 | || | |||| ||| ||||||| ||||||||| || || || | ||| ||||| Sbjct 1594 ATGTTCGCATGCAA--TGGATGATGCTCCAACAAGATCAGCCTGAAGATTTTGTCATTGC 1537 Query 68774 AACAGGGAAAACAACGAGCGTTCGTGAGTTCGT 68806 || || ||| || |||||||| || || Sbjct 1536 TACTGGCAAACAAATTTCTGTTCGTGAATTTGT 1504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102823929580800