Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq14 212 7e-50 seq3099 109 7e-19 >seq14 Length=2234412 Score = 212 bits (234), Expect = 7e-50 Identities = 809/1256 (64%), Gaps = 22/1256 (2%) Strand=Plus/Minus Query 113599 GAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCC-AGGCATACATATGCATCGAGGACA 113657 ||| ||||||||||| ||||| | || |||||| | | | | |||||| || | | Sbjct 232949 GAGATAGTACATCCCAGTCTTCAATCCA-GCTTCCCAACCGAAGAAATGCATGGACGTGA 232891 Query 113658 ACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGC 113717 ||| | |||||||| ||||| | || | ||||| |||||||| || Sbjct 232890 GCTTCTCAGGGGTTGGACTGGCCATGTGAACATTGGTCGACTGGGACTGATCGATAAAAG 232831 Query 113718 GTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTTC 113774 || ||||| || ||||| | ||| | || ||| | || ||||| || |||| Sbjct 232830 CCCCTCGATCAGCAGCCATTT---TCAGGATCATCCTCTGGGGAATCTCCCAGACTGTTC 232774 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 |||| || ||| || || |||| || | | ||||| | ||||| || ||| | Sbjct 232773 TGTACAGTGCCTTGATGTCTGCTGGTATTTTCTCGATACTCTGGATCGACCCATTGTTCG 232714 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 | || |||| |||||| || | ||||||| | | |||| |||| || || Sbjct 232713 CTATTATCAGATTCTTCATGTCGTCGTCCCAGAGATCGCGTTCAGTGAGGTCCTTCAGGA 232654 Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954 |||| |||||| || || ||||| | || ||| || ||||| ||| | | Sbjct 232653 GATGGGGATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGG 232594 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| ||||| | | ||| |||||||||| ||| ||||| || || ||||| ||||| | Sbjct 232593 TGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTG 232534 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 |||||| || || ||| | || || | || || |||||||| ||| Sbjct 232533 GTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGAGTTTAGCCC 232474 Query 114075 AGTCGTAGTTGAGCTTTGTC----TCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||| || || |||||| | | | |||||| || |||||||||| || ||| Sbjct 232473 AGTCCCAG---AGGTTTGTCGGTGTGACACC-CCACATGTCGTACTGGAGGATGCCCTGG 232418 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190 | ||||||| || | | |||||||| | |||| | | || | ||| || Sbjct 232417 CTGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGAT 232358 Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250 ||||| ||||| | | || | ||||| || || | || | | || |||||| Sbjct 232357 GCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCA 232298 Query 114251 TCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAG 114309 || || || | || ||| || | ||| |||| || ||||| || || || | Sbjct 232297 TCACTGTCGAATG-GATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAAT 232239 Query 114310 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCT 114369 || || || || |||||||| || || || || ||| || ||||| |||| Sbjct 232238 TCCCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGAC 232179 Query 114370 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT-TCATGAAGCTTTTCGT 114428 ||||| ||||| | |||||| |||||||||| || || | || ||| | || ||| Sbjct 232178 GTCGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGA-GTTTGTCGA 232120 Query 114429 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 114488 | ||| | | || || || ||| || | | || || || |||| ||| | Sbjct 232119 AGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGACTGCTATCGATGCCAAATTGC 232060 Query 114489 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 114548 | |||| ||||| | |||||| | || || || ||||| || | | Sbjct 232059 AGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATT 232000 Query 114549 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 114608 | || || || | |||||| ||||| || || |||| || ||||||||||| ||||||| Sbjct 231999 TTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGT 231940 Query 114609 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCA 114668 | || || || ||||| ||| ||| | ||||| || |||| | || |||||||| Sbjct 231939 AGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACAGCTCACGGGCTGGCA 231880 Query 114669 CAGTGGCG-TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727 | || || ||| || |||||||||||||||||||||| || || || || ||| Sbjct 231879 C-TTGACGCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGCTTATCGAATTCCTCA 231821 Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 114787 ||| | || |||| ||||| || | ||||| | | | ||| |||| | Sbjct 231820 CCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAACTCCAGGGACCGTCT 231761 Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 ||| ||||| |||||||| | || || ||||| || || |||| || || || Sbjct 231760 GCCTTGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTAGAACAGCTCACG 231705 Score = 181 bits (200), Expect = 1e-40 Identities = 704/1094 (64%), Gaps = 18/1094 (2%) Strand=Plus/Minus Query 113759 ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 113818 || ||||| || ||||||||||| ||| | || |||| || ||| | ||| | || Sbjct 776342 ATCTCCCAGACTGTTCTGTAGAGTGCCTTGAGGTCTGCTGGTATTTCCTCAATACTCTGA 776283 Query 113819 ATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGAC--CAATCT 113876 || || ||| | | || |||| |||||| | | ||||||| | ||| Sbjct 776282 ATTGACCCATTATTCGCTATTATCAGATTCTTCATGTGATCGTCCCAGAGATTGCGATCA 776223 Query 113877 TTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC 113936 | ||| ||| || ||||| |||||| || ||| ||||| | || || | Sbjct 776222 GT--GAGGTCCCTCAGCAGATGGGGATTGACGACCTGAAATTCACCAGACAGCACACGCC 776165 Query 113937 TCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGG 113996 | ||||| ||| | ||||| ||||| | | ||| |||||||||| ||| ||||| | Sbjct 776164 TGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTG 776105 Query 113997 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 114056 | || ||||| ||||| ||||||| || || ||| | || || | || || Sbjct 776104 TTGATGCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTT 776045 Query 114057 GTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC----TCCCCCTGCCACATATCA 114112 |||||||| ||||||| || || |||||| | | | |||||| || Sbjct 776044 TCTCCTTGAGTTTAGCCCAGTCCCAG---AGGTTTGTCGGTGTGACACC-CCACATGTCG 775989 Query 114113 AACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACC 114172 |||||||||| || ||| | ||||||| || | | |||||||| | |||| | Sbjct 775988 TACTGGAGGATGCCCTGGCTGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCT 775929 Query 114173 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 | || | ||| || ||||| ||||| | | || | ||||| || || | Sbjct 775928 TGGGCGAGTTCACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATG 775869 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGC 114291 || | | || |||||| || || || | || ||| || | ||| |||| || Sbjct 775868 TTGAGTTTCTGGGCCTCATCACTGTCGAATG-GATAACGCATCAGTAGGAATGCATCTGC 775810 Query 114292 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC 114351 ||||| || || || | || || || || |||||||| || || || || ||| Sbjct 775809 CAGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTC 775750 Query 114352 CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 || ||||| |||| ||||| ||||| | |||||| |||||||||| || || Sbjct 775749 AACTGGATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGAC 775690 Query 114412 T-TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 114470 | || ||| | || ||| | ||| | | || || || ||| || | | | Sbjct 775689 TGTCTTGA-GTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGACTG 775631 Query 114471 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 114530 | || || |||| ||| || |||| ||||| | |||||| | || || | Sbjct 775630 CTATCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGG 775571 Query 114531 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 114590 | ||||| || | || || || || | |||||| ||||| || || |||| || | Sbjct 775570 TGCACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGG 775511 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 |||||||||| |||||||| || || || ||||| ||| ||| | ||||| || ||| Sbjct 775510 CATCCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCC 775451 Query 114651 AGACATCGGCGGCTGGCACAGTGGCG-TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 | | || ||||||||| || || ||| || |||||||||||||||||||||| Sbjct 775450 ACAGCTCCCGGGCTGGCAC-TTGACGCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTAC 775392 Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 114769 || || || || |||||| | || |||| ||||| || | ||||| | Sbjct 775391 AGCTTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATC 775332 Query 114770 AGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCT 114829 ||| ||| |||| | || ||||| |||||||| | || || ||||| || || Sbjct 775331 AGACTCCAGGGACCGTCTGCCAGGACACGTTTCATGAACAAATCGGGTATCCACAGGGCG 775272 Query 114830 GAGAAGAGATCCCG 114843 |||| || || || Sbjct 775271 TAGAATAGCTCACG 775258 >seq3099 Length=8203 Score = 109 bits (120), Expect = 7e-19 Identities = 254/376 (68%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 10783 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 10842 || ||| ||||| || || || || || | || |||||| | ||| ||||| || Sbjct 7056 CTGACGGTCAAAACGGCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGT 6997 Query 10843 CGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTG 10902 || || || || | ||||| | | ||||| |||||||||||| || | || Sbjct 6996 GGCGGCAATCACGATAATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTG 6937 Query 10903 ATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTTGCTTAC 10961 || | ||||||||| |||||||||| | || | |||||||| ||||| || Sbjct 6936 GTTCAGGGTTTGTTCACGTTCATCATGACCACCGCCCAG-ACCCGCACCACGTTGGCGAC 6878 Query 10962 CGACGGCGTCAATTTCATCGATGAAAACGATACA-----CGGTTGATTTTCACGGGCAAC 11016 ||||||| || |||||||| ||||| | |||||| ||| | ||||| | || Sbjct 6877 CGACGGCATCGATTTCATCAATGAAGATGATACAAGGCGCGGCTT-TTTTCGCCTGC--- 6822 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 || || || || || || | |||||||||||||| |||||||| ||||| | | Sbjct 6821 -TCGAACATGTCACGCACACGAGATGCACCGACACCCACGAACATTTCAACAAAGTCAGA 6763 Query 11077 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 ||||| || | || ||| || || || | |||||| || || || ||| || |||| Sbjct 6762 ACCGGAA-ATGGTGAAGAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGG 6704 Query 11136 TCTTCCCCGTCCCAGG 11151 | || || || || || Sbjct 6703 TTTTACCTGTTCCCGG 6688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597323971261440