Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq2452 113 1e-20 >seq2452 Length=2364 Score = 113 bits (124), Expect = 1e-20 Identities = 249/364 (68%), Gaps = 12/364 (3%) Strand=Plus/Minus Query 32816 CATCACGCTTACCGCCAAGCATCTGCATGACGCCACCCATTTGTGGAATGACAATCTCAG 32875 |||| |||||||||||||||||||||| || || || | || || || | Sbjct 2211 CATCCTGCTTACCGCCAAGCATCTGCATTGATCCGCCAATATCGACAACTACT---TCCG 2155 Query 32876 TGGTGTATTTGTCCACGCCGCTG-CTG-TCAGTCCACTTACGAGTGCGAAGTTGTCCTTC 32933 | |||||| |||| ||| ||| ||| || |||||| | ||||| | ||| || || Sbjct 2154 TTGTGTATCTGTCTT-GCC-CTGACTGGTCTTGCCACTTCCTTGTGCGCAATTGGCCCTC 2097 Query 32934 TATATAAACCTGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTTCCGAA 32993 ||||| |||||||| || || || ||||| || || || || || || | |||||| | Sbjct 2096 GATATATACCTGCGAACCCTTGCGTAGATATTCACCAGCCACCTCTGCCAACTTTCCGTA 2037 Query 32994 GATAACAACTCGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCTTTCCA 33053 | || ||||||||||| || | || |||| ||||| || ||||||||| |||| Sbjct 2036 CAGCGTGACGCGATGCCATTCCGTGCGCTCCTTCTGCTCTCCAGTCTGCTTGTCTCTCCA 1977 Query 33054 CTGCTCAGATGTTGCAACAGAAAGGTTCGCAATTGCAGAGCCTGATGCTGAATATTTAAC 33113 ||||| || || |||| ||||| || | ||| | || | || || || Sbjct 1976 TGAATCAGAAGTGGCTACAGTCAGGTTTGCCACTGCCCATCCGCTCGGTGTGTAGCGCAC 1917 Query 33114 TTCAGGGTCATTTCCGAGAGTG-CCGACAATGATTACTTTATTTACGCCGC---GTGCCA 33169 || ||||| | ||||| ||| || || | || ||||| |||||||| | || ||| Sbjct 1916 TTTGGGGTCTTGCCCGAG-GTGTCCCACGAGAATCACTTTGTTTACGCCTCTCTGTCCCA 1858 Query 33170 TTTA 33173 |||| Sbjct 1857 TTTA 1854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144034812759808