Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq2300 91.5 7e-14 >seq2300 Length=16383 Score = 91.5 bits (100), Expect = 7e-14 Identities = 185/269 (69%), Gaps = 12/269 (4%) Strand=Plus/Minus Query 66072 ATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGAC 66131 ||||| || |||||| | ||||| || || ||| || || || || |||| Sbjct 15129 ATCGATGCTGAACATGCACTCGATCCGATTTATGCCAAAAAACTGGGTGTCGACATCGAT 15070 Query 66132 AATCTCGTG-GTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGAT---CGTTGACCT 66187 || || || ||| | ||||| || || ||||||||||| | ||||| || || | | Sbjct 15069 AACCTGCTGTGTTCT-CAGCCTGATACCGGCGAGCAGGCGTTAGAGATTTGCGATG-CGT 15012 Query 66188 T--CTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTG 66245 | | ||| || |||| |||| | | ||| | || ||||| |||||||| ||| | Sbjct 15011 TGACGCGT----TCAGGCGCGGTTGACGTGATCATCGTTGACTCCGTGGCGGCACTGACG 14956 Query 66246 CCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTG 66305 || ||||| ||||||| || ||||| || || ||| | || ||| || ||| || Sbjct 14955 CCAAAAGCGGAAATCGAAGGTGAAATCGGTGATTCCCACATGGGGCTGGCGGCTCGCATG 14896 Query 66306 ATGTCTCAGGCCATGCGCAAGCTGACCGG 66334 ||| |||||| ||||| |||||| |||| Sbjct 14895 ATGAGTCAGGCGATGCGTAAGCTGGCCGG 14867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242458674131456