Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011142.1 Length=47453 Score E Sequences producing significant alignments: (Bits) Value seq3413 120 9e-23 >seq3413 Length=1126 Score = 120 bits (132), Expect = 9e-23 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 43764 TTCCATGCCATCAAATGCCGGGTGATCATTAATGATACGTAACCATCCATCTACCCCAAT 43823 |||||||||||| ||| ||| || || |||||||| || ||||||||| || || | Sbjct 855 TTCCATGCCATCGAATTGCGGATGTTCGTTAATGATCCGCGCCCATCCATCGACACCGAC 914 Query 43824 AACAGGAACAATCGATCCTTTATCTGGGTAGGCATAAATCTCTTTTGTCCAAGGGTTAAG 43883 ||| ||||||||| || || || || |||| ||||| ||||||||||| ||||| || Sbjct 915 AACCGGAACAATCCCGCCCTTGTCAGGAAAGGCGTAAATTTCTTTTGTCCACGGGTTGAG 974 Query 43884 CCCATACTGATTGGCAACAATCAATAGCGCTGTCATTTG 43922 || ||||| |||||||| || | ||| || || | ||| Sbjct 975 TCCGTACTGGTTGGCAACGATAAGTAGGGCGGTAAATTG 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151720850576640