Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14 127 2e-24 >seq14 Length=2234412 Score = 127 bits (140), Expect = 2e-24 Identities = 267/392 (68%), Gaps = 6/392 (2%) Strand=Plus/Plus Query 94993 CAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG-- 95050 |||||||| | |||| |||| | |||||||| | || | || | ||||||| Sbjct 232419 CAGGGCATCCTCCAGTACGACATGTGGGGTGTCACACCGACAAACCTCTGGGACTGGGCT 232478 Query 95051 AAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110 || ||| | | | || | |||| ||||| || | ||| | ||||| |||| || | Sbjct 232479 AAACTCAAGGAGAAAATATC-TCAA-CACGGGGTCAGGAACTCTCTGCTACTGGCACCAA 232536 Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170 |||| || || || || || |||||||| || ||||||||| | |||| |||| |||| Sbjct 232537 TGCCAACAGCATCAACAGCCCAGATCCTGGGTAACAACGAGGCCATCGAGCCCTACACCA 232596 Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230 |||| | ||| |||||| ||||| | || ||||||| ||| |||| || |||| Sbjct 232597 GCAACATCTACTCCAGGCGCGTGCTGTCTGGTGAATTCCAGGTCGTCAATCCCCATCTCC 232656 Query 95231 TACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCG 95290 | |||||| || | | | | |||| ||| | | ||||| | | || ||| Sbjct 232657 TGAAGGACCTCACTGAACGCGATCTCTGGGACGACGACATGAAGAATCTGATAATA-GCG 232715 Query 95291 C-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAG 95349 ||| || || |||||| ||| | ||||||| | ||||||||||| || |||| Sbjct 232716 AACAATGGGTCGATCCAGAGTATCGAGAAAATACCAGCAGACATCAAGGCACTGTACAGA 232775 Query 95350 ACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381 || || |||||||| || ||| | |||| || Sbjct 232776 ACAGTCTGGGAGATTCCCCAGAGGATGATCCT 232807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494698661729280