Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq3688 190 5e-44 >seq3688 Length=22785 Score = 190 bits (210), Expect = 5e-44 Identities = 776/1201 (65%), Gaps = 59/1201 (5%) Strand=Plus/Minus Query 3340 GGCCAGCATGTACAGCATATGCAACGCGTCCGGGCCGTCGTCGTGATCGGCTTCCGGATA 3399 ||||||| | | |||||||||| |||||||||||||||||| || ||||| ||| | Sbjct 7740 GGCCAGCGTCCAGAGCATATGCAGCGCGTCCGGGCCGTCGTCATGGTCGGCGCGGGGAAA 7681 Query 3400 GTGGGTCAACTGCTCGACGAGCACTGTCTGGCTCTTGTGCAGGCGAACCGTGCCGTTCGC 3459 |||| || ||||| | || |||||||| |||||| || | ||||| | Sbjct 7680 GTGGCGCAGCTGCTGTATCAGTGTGGTCTGGCTGGCGTGCAGACGGATAAGCCCGTTTTC 7621 Query 3460 GCAGTGCGGCTGAAGAGACAGAATCCGCAGGTCTTTGTCGTCGCTGGAGCGGATGCCGCG 3519 || ||||| || | | || |||| |||||| | || | || | || Sbjct 7620 CATATGGGGCTGCAGGGTCTCGATACGCAACAGCTTGTCGGCATGGGGGATAATAGCCCG 7561 Query 3520 CGCCGGAACCGGGATCATTC-GCTTTTGTGAACGTTCGACCAGCACATCCTTG---AAGA 3575 |||||| |||||| | | | ||| | | || | | |||| || || | || Sbjct 7560 CGCCGGCACCGGG-TGACCCAGCTGTGCCGCGCGCTTAATCAGC---TCGGTGCGCAGGA 7505 Query 3576 ACTCCTGGAACTGGATGATCTCGATGCCCCATACCAGGCAACCGTATTGCTCCTGGAACG 3635 ||||||| ||||| | ||| |||||||| ||||| || ||||| || || | | Sbjct 7504 ACTCCTGAAACTGCACCGCCTCAATGCCCCACACCAGACAGTGGTATTCCTTTTGCAGAG 7445 Query 3636 CGATAATCGTTTCGATCTGGAGGTTGGGCAACATGCGTGCG-ATCTTCGCTTCCACCACA 3694 | ||||| | ||| | || |||| | || |||| |||| ||||||||||||| Sbjct 7444 CAATAATATTGCTGATAATGGCGTCCGGCAGCC-GCTTGCGTATCTGCGCTTCCACCACA 7386 Query 3695 TCGAGCACACCGGTCTTGCGGTTGAGGCCACCGACCAGGCACGCACACGGGTCACGGCCC 3754 || ||||| ||||| ||| || | |||||||||||| ||| |||||||||||| Sbjct 7385 TCCAGCACGCCGGTGGCGCGATTAAAGCCACCGACCAGCAGCGCTGACGGGTCACGGCTG 7326 Query 3755 TTGTTGTGCTTGCCCATCGACGGATCGTGTGCACCGAAGAAAATCCAGGCGTCG-GACGG 3813 | |||||| | || ||| || ||| |||||| ||| ||| | ||| Sbjct 7325 GCCCCGGCCTTGCCGAGGCTGGGGTCGCAGGCCCCGTAGAAAAGCCACTCGTTAAGCCGG 7266 Query 3814 ATGCACCCAGTACACCAGCTTCTGG---AACGGCGCGTTCTCGCTATTGGTCGGATCGTT 3870 || |||||| | ||| ||| ||| |||| | || | || ||| | || Sbjct 7265 TTG-ACCCAGAAATGCAGGCAGTGGGCAAACAGCGCATCTTCACCGCTGACCGGGGCATT 7207 Query 3871 CTGATATTCGCAATCGAACGCGTGGTGATCGTTC---GCGCGAATCTTCATCAGGCGCAA 3927 ||| || ||| ||| || | | |||| ||| ||||| || | ||||||| || Sbjct 7206 CTGGTACTCGGCATCAAAGGTGGCGTGACCGTCACGGGCGCGGATATGCATCAGGGTCAG 7147 Query 3928 CAGCGGGCGCATGGCCGGCCACGATACGACAGCGCCATCGTCCATTTCAGCCTTGCGCTG 3987 |||||| || || | ||| || || | ||||| || ||||| || | | || || Sbjct 7146 CAGCGGCCGT---GCGGACCAGGAGACTTCCGCGCCTTCCTCCATCTCGG---TACGGTG 7093 Query 3988 ---CGCATAGAACGCGT-CGCATGCTTCCTCGCCTTCATTCAGGAATACTTCTTCCCACT 4043 || ||| || | | ||| || ||||| || | || | || | ||||| Sbjct 7092 TGACGTATAAAAATCCTGCGCC-GCATCCTCTCCCTGGTTACGCAAGCGCTGCTCCCAGC 7034 Query 4044 TTTCCCACAGATCCAGCCGCTTCGGCCACTCGATGATGGCGC--GGAATTTATGCGACTC 4101 | ||||||| ||| | |||||||| ||||| || || | ||| | Sbjct 7033 TCTCCCACAACGACAGGTTCACCGGCCACT-------GGCGCAGGGCCTTAAAGCGCGCC 6981 Query 4102 -----CCATAGCGGGCTGCGATGCACGCGGT-TGGCCACGCCG--TCGTAATGCAGAATC 4153 |||||||||| | || || | | || || ||| ||||||||||| || Sbjct 6980 TGCCGCCATAGCGGGTT---ATTCAGGGTGCGTGATAACACCGAGTCGTAATGCAGGATG 6924 Query 4154 GTGTTGAGGTAGATGATGTCCATCGAGCCGTCCGGCGG----ACCGAGCGGCATCACGAC 4209 ||| || |||| | ||||||| | || | | ||| ||||||| |||| Sbjct 6923 GTGCCGATATAGACCA----CATCGAGTTTTGCGCCCGCACCACCCAGCGGCAGCACGGT 6868 Query 4210 CTTTTTGACCCAGCGTTCAAGCTTGTCGCGCTGGGTCTTCTGCTGCACGTTCTCGTCGTT 4269 ||| | | |||| ||| ||||||||||||||| | | | || | ||||||||| Sbjct 6867 TTTTCTCAGCCAGTTTTCCAGCTTGTCGCGCTGGTCCGGGTTGCGTACCTGCTCGTCGTT 6808 Query 4270 CTCGATGTCGTCGAGCAACACCAGGTCAGGCCGAAACGGGCCATGCCGAATACCGCGCAT 4329 ||| || ||||| || | |||||||||||| || |||| || || || | ||||||| Sbjct 6807 CTCAATATCGTCCAGTATCACCAGGTCAGGGCGGTACGGCCCGTGGCGCAGGCCGCGCAG 6748 Query 4330 CCGCTTGCCCGAGCCGAACGCCTGCAGCTTGATGTCGGTTGC-CGTTAGCGCAACGCCGA 4388 | || || |||| | |||||| |||||| || ||||| ||| || ||| | Sbjct 6747 CTTTTTACCGCTGCCGGCCACCTGCACCTTGATATC-GTTGCGCGTCAGGATGGTGCCCA 6689 Query 4389 CGTTCCAAACGCGCCCCTTGCCGACGTGTTCGGGAAAGTCCATCGCGAGCCGCGGATTGT 4448 | ||| ||||||||| ||||| | |||||| ||||| | ||||| || ||| Sbjct 6688 TCTGCCAGACGCGCCCCATGCCGCAGGCTTCGGGGAAGTCAGCCAGCAGCCGGGGGTTGA 6629 Query 4449 CGGTCAGCTCGACCTTGATCGCCTCCAGCATCATCTGCGCCTGGTCGCTGCTGTCCATCA 4508 ||||||| ||||||| || || |||||| | ||||||||| || ||||||| Sbjct 6628 ATTCCAGCTCGGCCTTGATGGCTTCGAGCATCGGGTAGGCCTGGTCGATGGAATCCATCA 6569 Query 4509 C 4509 | Sbjct 6568 C 6568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120304730973952