Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq2631 248 9e-61 >seq2631 Length=39719 Score = 248 bits (274), Expect = 9e-61 Identities = 628/946 (66%), Gaps = 22/946 (2%) Strand=Plus/Plus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || |||||||||||| | ||||| ||||| ||| |||||||| || |||||| Sbjct 34433 GCGATCAACTGGAACAAAATCGAAGACGACAAGGATTTGGAAGTGTGGAATCGTCTGACC 34492 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054 | |||||||||||||||||||| | ||| |||| || ||| | | || ||| | | Sbjct 34493 AGTAACTTCTGGCTGCCGGAGAAAGTGCCGCTGTCGAACGACATTCCCTCCTGGAGCACG 34552 Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114 | || ||||||||| | | ||||| || || || || || || ||| |||||||| Sbjct 34553 TTAACTCCCCAAGAGCGCCAGTTAACCATCCGCGTTTTTACTGGACTTACGCTGCTGGAC 34612 Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174 ||| | || |||||| || || | | || || |||||| |||| ||||| ||| Sbjct 34613 ACCCTACAAAACACCGTGGGTGCCCCTACCTTGATGCCCGACGCCGTCACGCCGCATGAG 34672 Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGC-GTGCACGCACGCAGCTAC---TC 156230 || || || | |||||| || ||||| ||| || ||||| || ||| || Sbjct 34673 GAAGCAGTACTGTCAAACATCAGCTTTATGGA-AGCGGTACACGCCCGTTCATACAGTTC 34731 Query 156231 GAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGA 156290 | || || |||||||| || ||||| || | || | || | |||||| || Sbjct 34732 G---ATTTTTTCGACGCTCTGTCTCACCAGCGAAGTAGATGATGCCTATCGCTGGAGTGA 34788 Query 156291 GGAGAACGCCAACCTGCAGAAGAAGG-----CTGAGATCGTGCTCAGCTACTACAACGGT 156345 || ||||||| |||| || || | |||| || || || ||| || ||| Sbjct 34789 AGAAAACGCCACGTTGCAAAAAAAAGCCACACTGA-TTCTTGAACA-ATACCGCAGCGG- 34845 Query 156346 GACGACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGC 156405 ||| || || | | ||| ||||| | | || || || || ||||| | Sbjct 34846 --CGATCCCCTGATGAAAAAGATCGCCAGCGTATTTCTCGAATCTTTTCTATTCTATTCC 34903 Query 156406 GGCTTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATG 156465 ||||| || |||||||||| |||||| || | |||||| |||||||||||||| || Sbjct 34904 GGCTTTTATCTGCCGATGTACTGGTCCAGCCGTGCCAAGCTGACCAACACCGCCGATCTG 34963 Query 156466 ATCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAG 156525 || || || || ||||| || || ||||||||||| || || || ||||| || |||||| Sbjct 34964 ATTCGCCTGATTATCCGTGATGAAGCCGTGCACGGGTATTATATTGGCTATAAATTCCAG 35023 Query 156526 AAGGGCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAG 156585 |||| || | | | | | || || ||| | | || |||||| ||| || Sbjct 35024 CAGGGTCTCGCCATCGTTGACGTTGTGCGGCAACAGCAGATAAAAGACTACGCCTTCGAT 35083 Query 156586 CTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACC 156645 | || || || | ||||| || ||||| | | || ||||||| Sbjct 35084 TTAATGCAGGATCTCTATGACAATGAAATTCTCTACACTGAAGCGCTGTACGACGGTGTG 35143 Query 156646 GGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAAC 156705 ||| ||| ||||| ||||| ||||| |||| ||||||| ||| || || || |||| Sbjct 35144 GGCTGGACGGAGGATGTGAAAAAGTTTCTGCATTACAACGCCAATAAAGCATTGATGAAC 35203 Query 156706 CTGGGCTACGACGCGCTGTT--CAGCCGCAGCGACTGCGACGTCAACCCGGCCATCCTGA 156763 || || || || || |||| | ||| ||| || ||||| ||||| ||||| Sbjct 35204 CTTGGTTATGAAGCATTGTTCCCTGCCAACATGAC--AGATGTCAATCCGGCAATCCTTT 35261 Query 156764 GCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGT 156823 ||| |||| ||| | ||||| || ||||| |||||||| || || ||| | | Sbjct 35262 CCGCATTGTCACCCAACGCGGACGAAAATCACGATTTCTTCTCCGGTTCAGGCTCTTCAT 35321 Query 156824 ACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTT 156869 ||||||| | |||| || |||||||| || |||||||| || Sbjct 35322 ACGTCATCGGTAAGGCGGTTAATACCGAAGATGATGACTGGGATTT 35367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526572280719360