Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 127 2e-24 seq10 116 4e-21 >seq14 Length=2234412 Score = 127 bits (140), Expect = 2e-24 Identities = 596/937 (64%), Gaps = 16/937 (2%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| || ||||| || || | || ||| || || | || | ||||| ||| | || Sbjct 776198 TTGACGACCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGC 776139 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || | || ||||| || || || || || || || | ||| || ||||| |||| Sbjct 776138 TCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGT 776079 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGA---ATGTCGTCCTTCAACGCCTGCCAATCC 153206 | || ||| |||| | ||||| | || || | ||||| | ||| ||| Sbjct 776078 AGCAGAGAGTTCCTGACCCCGTG---TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCC 776022 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | |||||| | ||||||||||||||| | | || | ||| | || Sbjct 776021 CAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGC 775962 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||| |||| ||| | || | |||||| ||||| ||| ||||| || Sbjct 775961 GAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAGG 775902 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 || |||||||| | ||| ||| ||| || | ||||| || || || || ||| Sbjct 775901 GCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCG 775842 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 | || |||| ||| | || || || ||||||||||| | || | || ||||| Sbjct 775841 AATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGA 775782 Query 153447 CGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATT 153506 || || || |||| | || || | | | ||||||| |||| ||||| | Sbjct 775781 CGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGATGACC 775722 Query 153507 TTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTC 153566 ||| ||| || | || ||||| | | ||| ||||| ||||| ||||||||| Sbjct 775721 CTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGGTC 775662 Query 153567 AT-TTCG-TCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCG 153624 | ||| | || | | ||| || || || || || |||| ||| ||||| || Sbjct 775661 TTCTTCACTGGATCCACAAACATG--TTGACTGCTATCGATGCCAAATTGCAGACAGCAA 775604 Query 153625 TCTCTTCGGCG-TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683 || |||| | ||| ||||| |||||||||| ||| | ||||||||||||||| Sbjct 775603 CTTCATCGGGGCTCGA-GTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTGTT 775545 Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743 || | || | ||||||| ||| | ||||| || || ||| | |||||||| || Sbjct 775544 CCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAGTT 775485 Query 153744 CCGGTCTCGACTTGCG--TTTCGACGATAAACCTATGCAGGTCCTGCGCTCGCACCCGCT 153801 || ||||| ||||| | || || || | ||| ||| | ||| |||| | Sbjct 775484 CCAGTCTCAACTTGTGACATTAGA--ATTGCTGTCCACAGCTCCCGGGCTGGCACTTGAC 775427 Query 153802 GCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGC 153861 || || || |||| |||||| |||||| || || || || || | Sbjct 775426 GCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCCCAAG 775367 Query 153862 AGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGA 153921 ||| |||||| ||||||| || || |||||||| ||| | |||| || || Sbjct 775366 TGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAGACTCCAGGGACCGTCTGCCAGGA 775307 Query 153922 CGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTA 153958 | ||| |||||||| ||| || | ||| || ||||| Sbjct 775306 CACGTTTCATGAACAAATCGGGTATCCACAGGGCGTA 775270 Score = 122 bits (134), Expect = 9e-23 Identities = 595/937 (64%), Gaps = 16/937 (2%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| || || || || || | || ||| || || | || | ||||| ||| | || Sbjct 232645 TTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTAGGGC 232586 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || | || ||||| || || || || || || || | ||| || ||||| |||| Sbjct 232585 TCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGT 232526 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGA---ATGTCGTCCTTCAACGCCTGCCAATCC 153206 | || ||| |||| | ||||| | || || | ||||| | ||| ||| Sbjct 232525 AGCAGAGAGTTCCTGACCCCGTG---TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCC 232469 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | |||||| | ||||||||||||||| | | || | ||| | || Sbjct 232468 CAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGC 232409 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||| |||| ||| | || | |||||| ||||| ||| ||||| || Sbjct 232408 GAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAGG 232349 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 || |||||||| | ||| ||| ||| || | ||||| || || || || ||| Sbjct 232348 GCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCG 232289 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 | || |||| ||| | || || || ||||||||||| | || | || ||||| Sbjct 232288 AATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGA 232229 Query 153447 CGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATT 153506 || || || |||| | || || | | | ||||||| |||| ||||| | Sbjct 232228 CGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGATGACC 232169 Query 153507 TTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTC 153566 ||| ||| || | || ||||| | | ||| ||||| ||||| ||||||||| Sbjct 232168 CTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGGTC 232109 Query 153567 AT-TTCG-TCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCG 153624 | ||| | || | | ||| || || || || || |||| ||| ||||| || Sbjct 232108 TTCTTCACTGGATCCACAAACATG--TTGACTGCTATCGATGCCAAATTGCAGACAGCAA 232051 Query 153625 TCTCTTCGGCG-TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683 || |||| | ||| ||||| |||||||||| ||| | ||||||||||||||| Sbjct 232050 CTTCATCGGGGCTCGA-GTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTGTT 231992 Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743 || | || | ||||||| ||| | ||||| || || ||| | |||||||| || Sbjct 231991 CCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAGTT 231932 Query 153744 CCGGTCTCGACTTGCG--TTTCGACGATAAACCTATGCAGGTCCTGCGCTCGCACCCGCT 153801 || ||||| ||||| | || || || | ||| || | ||| |||| | Sbjct 231931 CCAGTCTCAACTTGTGACATTAGA--ATTGCTGTCCACAGCTCACGGGCTGGCACTTGAC 231874 Query 153802 GCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGC 153861 || || || |||| |||||| |||||| || || || || || | Sbjct 231873 GCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCCCAAG 231814 Query 153862 AGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGA 153921 ||| |||||| ||||||| || || ||||||| ||| | |||| || |||| Sbjct 231813 TGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAACTCCAGGGACCGTCTGCCTTGA 231754 Query 153922 CGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTA 153958 | ||| |||||||| ||| || | ||| || ||||| Sbjct 231753 CACGTTTCATGAACAAATCGGGTATCCACAGGGCGTA 231717 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||| || || || || |||||||| |||||||| | Sbjct 1933591 GATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCATCCTCGAGCTGTTTACCAGCG 1933532 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || | ||| ||||| || || || || || ||||| ||| |||| | ||| | Sbjct 1933531 AAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATTTTGGCTTTGAC 1933473 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||| | | ||||||||||| || | || || ||||| || ||||| Sbjct 1933472 ATTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATGGTCTTCCCAGTTAGGGTTTT 1933413 Query 138600 TACAAAAATCTGCATG 138615 ||| || ||||||||| Sbjct 1933412 TACGAAGATCTGCATG 1933397 >seq10 Length=2352850 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | ||| | ||| | | | ||||| ||||||||||||||||| Sbjct 820117 CCTCCTCGAAGACGAAGAACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTGAA 820058 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| | ||||||||| | |||| | ||||||||| || || || Sbjct 820057 AGAGTTCTTCCGTCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTGGG 819998 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| |||| | ||||| | ||| | ||||| | | || || Sbjct 819997 ATACCTTCTTTATCT-TGAATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGAC 819939 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| || || |||||||||||||| Sbjct 819938 TTCCAGGGTGATGGTTTTGCCAGTCAATGTCTTAACAAAAATCTGCAT 819891 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| |||| | ||| | ||| || || | | || || || || |||||||||||| Sbjct 821259 AGCCACCTCTGAGACGAAGAACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGG 821200 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || ||| | || || ||||||||||| | | |||| | ||||||||| || |||| Sbjct 821199 ACAAAGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAG 821140 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || || || ||||| |||||| || | | ||| | ||||| | | ||| | Sbjct 821139 GAATGCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTA 821080 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || ||||| || ||||| || ||||||||||| Sbjct 821079 CTTCGAGTGTGATGGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 821031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | || || || | | || ||||| || ||||||||||| Sbjct 820802 GCCACCTCGAAGACGTAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCTGA 820743 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | || | || || | ||||||||| | |||| ||||| |||||||| |||| Sbjct 820742 GAGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGAG 820684 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || || ||||| || ||| || || | | ||| | ||||| | | ||| | Sbjct 820683 GAATTCCCTCTTTATCCTGGATCTTCGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTA 820624 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || ||||||||||| || |||||||||||||| Sbjct 820623 CTTCGAGTGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 820575 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||||| || || || | |||| || || || ||||||||||| | Sbjct 820345 CCTCCTCTCAGACGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCTGAC 820286 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || ||||||||||| | |||| | |||||| ||||| || || Sbjct 820285 AGAGTTCTGCCA-TCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820227 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | | |||||| Sbjct 820226 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCCAC 820167 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||||| |||||| || ||||||||||| Sbjct 820166 TTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACGAAAATCTGCAT 820119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496237785384960