Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_012223.2 Length=44899 Score E Sequences producing significant alignments: (Bits) Value seq2728 91.5 4e-14 >seq2728 Length=1005 Score = 91.5 bits (100), Expect = 4e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 28953 AACCAGCGATCCGTGAATGCCTTATAACTACTGCCGAGGCGTTCGCCCCCGTCGACAAAC 29012 |||||||| |||||||| | | ||| ||||| || | ||| ||||||||| Sbjct 205 AACCAGCGGGAAGTGAATGCGCCAAAGGTACGCCCGAGACGCTGGCCATGATCGACAAAC 146 Query 29013 CACGTCTGGCCCCATAGGTCTTTTAGTCCGTTTGGTGCGGGTGTGCCGGTCAGGTTAATC 29072 || | ||||||||| ||||| | || ||||| || || || || ||||| || || ||| Sbjct 145 CATGACTGGCCCCACAGGTCGATCAGGCCGTTCGGCGCAGGCGTACCGGTGAGATTCATC 86 Query 29073 CAGCGCTTGACGTGCTTATGTGCGATCGCCGCCAGGGC 29110 ||||| | ||||||||||| |||| |||||| || Sbjct 85 CAGCGGTGTACGTGCTTATGCGCGACTTTCGCCAGTGC 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143548435678976