Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq2351 176 5e-39 >seq2351 Length=10305 Score = 176 bits (194), Expect = 5e-39 Identities = 286/410 (70%), Gaps = 4/410 (1%) Strand=Plus/Minus Query 139678 CATCAGGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCC 139737 |||||| || || | ||| ||||||||||| || ||||| | |||||| ||||||| || Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 139738 CTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAG 139797 |||||||| | ||| | ||| ||||| | || | |||||| | |||||| | | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 139798 AGTCGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATG 139857 || ||||| ||||| || | ||||| |||||||| || || || || ||||| ||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 139858 TTTCCAGAATGGGATAACGCCAGTATGACGAA--CTTCACCATGCCCGATCTTAGATCCT 139915 ||| |||| || ||| ||||||||| ||| |||||||| | ||| || Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATG--GAATGCTTCACCACCGCGAATCGGGCTACCC 2759 Query 139916 TCCGCGCGAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATG 139975 ||| ||||| || ||||| || |||||||| ||||||| || || || | | Sbjct 2758 AGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACG 2699 Query 139976 ATTGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACAC 140035 || ||| | | || |||| ||| | || ||| | | || |||| ||| || Sbjct 2698 ATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAG 2639 Query 140036 GAACTAAATTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGG 140085 || || || || || |||||||||||||| || | ||| ||||| || || Sbjct 2638 GAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGG 2589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532383192483840