Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq2351 161 1e-34 >seq2351 Length=10305 Score = 161 bits (178), Expect = 1e-34 Identities = 287/419 (68%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 142992 CATCAGGTCGTTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTTTCATCGACACC 143051 |||||| | ||| ||||| | ||||| || | ||||| | ||||| | || || || Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 143052 TTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143111 |||||| ||||| || ||||| |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 143112 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 143171 || || || ||||| || | || || ||||| || ||||| || || ||||||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 143172 TTTCCAGAATGGAATAACACCAGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTC 143231 ||| |||| |||||| |||||||| ||||||| || ||| | ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAG 2757 Query 143232 AGCACGAATCATACCAACGTTAATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 143291 |||||||| ||| ||||||| || ||||| ||||| | |||| ||||| | || Sbjct 2756 CGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGAT 2697 Query 143292 TGAGTTTGCAGTTTTGTTAATAGATTTCAGTGAGTCACCTGCTTCAATAACAACACAAGA 143351 | | | || |||||| || | ||| ||| || ||||| | || || || Sbjct 2696 AGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGA 2637 Query 143352 ACTAAATTGACGGGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAACCT 143410 || || ||||||||||| ||||| | || | ||| || || || ||||| |||| || Sbjct 2636 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548487993646080