Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_013597.1 Length=43970 Score E Sequences producing significant alignments: (Bits) Value seq3956 123 7e-24 >seq3956 Length=1013 Score = 123 bits (136), Expect = 7e-24 Identities = 221/321 (69%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 26040 TCATATTTTCCTGTTTTACGGATTGCCGGTAAAACTTCCGCTGTAACCCATTTTCTGAAA 26099 || ||||| || || || || |||| || | || || ||| ||||| || | ||| Sbjct 319 TCGTATTTGCCGGTCTTGCGAATTGAGGGAAGTACCTCACTTGTTACCCACTTGCGGAAG 378 Query 26100 CGGTGCGGAACAGATCCTTTTTTCACTGCGTCGCGGCAACGTAAGATTAAAGTGTACATT 26159 || || || | | |||| ||||| ||||| ||||| || | | || ||| |||| Sbjct 379 CGATGGGGCAGGGTGCCTTGCTTCACAGCGTCACGGCAGCGGAGTACCAAGGTGAACATG 438 Query 26160 CCGCTTTCACTGACGATGTTCATTTCTTGTTGTCCGCTTGGGGTGTAAATTAAACTTACA 26219 ||| ||| || ||| | || || |||| | |||||||||||| |||||||| Sbjct 439 CCGGATTCGGAGATGATAGCTAAGTCCTGCCGTCCTCCAGGGGTGTAAATTGAACTTACA 498 Query 26220 CCCTTTTCATCGTCATCTAAAGCAAGTAAAGACATTCGGGAATTTGTTAAGTTGATTGCG 26279 |||| || || || || || || ||| |||||| || ||||| |||| | | | Sbjct 499 TCCTTCTCGTCATCGTCCAATGCTTGTAGAGACATGCGAGAATTCGTTAGCTCCAGAGAA 558 Query 26280 TCACAAACATCTTTAGCAACGAACCAAGGCTCATTGTTGATGGCTAAAGTGCGGATGGAT 26339 ||||||||||| || ||||| ||||||||||||| || || | |||||| | | Sbjct 559 TCACAAACATCCTTGGCAACAAACCAAGGCTCATCATTAATAATGATAGTGCGAA--CAA 616 Query 26340 TTTGA--TTCAAAATTGAATG 26358 | ||| ||||||| |||||| Sbjct 617 TGTGATTTTCAAAAGTGAATG 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140575775757312