Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_013600.1 Length=45169 Score E Sequences producing significant alignments: (Bits) Value seq2728 98.7 3e-16 >seq2728 Length=1005 Score = 98.7 bits (108), Expect = 3e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 28281 TGAACCAGCGGTCGGTGAATGCCTTATAGCTACTACCGAGGCGTTCACCACCGTCGACGA 28340 ||||||||||| |||||||| | || ||| ||||| || | ||| ||||| | Sbjct 207 TGAACCAGCGGGAAGTGAATGCGCCAAAGGTACGCCCGAGACGCTGGCCATGATCGACAA 148 Query 28341 ACCACGTCTGACCCCATAAGTCTTTCAAGCCGTTTGGTGCGGGTGTGCCGGTCAAGTTAA 28400 |||| | ||| ||||| | ||| ||| |||||| || || || || ||||| | || | Sbjct 147 ACCATGACTGGCCCCACAGGTCGATCAGGCCGTTCGGCGCAGGCGTACCGGTGAGATTCA 88 Query 28401 TCCAGCGCTTGACGTGCTTATGTGCAATCGCCGCCAGTGCGCGTGCGCGCTTACTGCCCT 28460 ||||||| | ||||||||||| || | ||||||||| |||||| || | ||| | Sbjct 87 TCCAGCGGTGTACGTGCTTATGCGCGACTTTCGCCAGTGCCGCTGCGCGTTTGCCGCCTT 28 Query 28461 GC 28462 || Sbjct 27 GC 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144412394967296