Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq14 179 6e-40 >seq14 Length=2234412 Score = 179 bits (198), Expect = 6e-40 Identities = 469/701 (67%), Gaps = 32/701 (5%) Strand=Plus/Minus Query 203835 TCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACA 203894 |||||||||| || |||||||||||||| || |||||| | | || |||||||||| Sbjct 776551 TCGTCTTGTCGACAGTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACA 776492 Query 203895 TGCCGGTCTTTAGGCC--CTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 | || ||||| | || |||| ||| ||| | | |||||||| | ||||| |||| Sbjct 776491 TTCCAGTCTTCAATCCAGCTTC--CCAACCGAAGAAATGCATGGACGTGAGTTT-CTCAG 776435 Query 203953 -GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGAT 204011 | | || | ||||||||||| || || ||||| || |||| |||| | | |||| Sbjct 776434 TGGTTGGATTGGCCATGTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGAT 776375 Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTC 204071 | || ||||| |||| || || |||| | ||||||||| || || || | | || | Sbjct 776374 CAGCAGCCATTTTGAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGA-GTGCC 776316 Query 204072 T---GGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTC 204128 | ||| || | || | || || || || || || || | || || | || Sbjct 776315 TTGAGGTCTGCT--GGTATTTCCTCAATACTCTGAATTGACCCATTATTCGCTATTA-TC 776259 Query 204129 TCA-TCCTCGTCTCCTCCCCCCACA---TGCCCAACCTGATCAGCTCCCGCACCAGGTGG 204184 | || || | | || |||| | || | | | | | || |||| || ||| ||| Sbjct 776258 AGATTCTTCATGTGATCGTCCCAGAGATTG--CGATCAG-TGAGGTCCCTCAGCAGATGG 776202 Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 || |||| || |||||| || || |||||||| | | || | | | |||| ||||| | Sbjct 776201 GGATTGACGACCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAG 776142 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || |||| ||||||||||| || | ||||| || || || || ||||| || ||| Sbjct 776141 GGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCC 776082 Query 204305 AGGAGCAGGGAGTTGCGCACACCGT------ATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358 || ||||| ||||| | || |||| || ||| || || | || || | Sbjct 776081 AGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCC 776022 Query 204359 CAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG 204418 ||| || | | | ||| | || |||||||||||| |||| | |||||| || ||| Sbjct 776021 CAGAGGT---TTG---TCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTG 775968 Query 204419 ACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCG 204478 ||||| ||| ||||||||| |||| | ||||| || || | || || || Sbjct 775967 ACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCC 775908 Query 204479 GCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 ||| ||| |||||| | |||||| |||||||| | ||| Sbjct 775907 TCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTT 775867 Score = 176 bits (194), Expect = 7e-39 Identities = 468/700 (67%), Gaps = 30/700 (4%) Strand=Plus/Minus Query 203835 TCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACA 203894 |||||||||| || ||||| |||||||| || || || ||| | | || |||||||||| Sbjct 232998 TCGTCTTGTCGACAGTGAATTGAATGGCATTGACAGCTGGCTTCGTCCTGAGATAGTACA 232939 Query 203895 TGCCGGTCTTTAGGCC--CTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA- 203951 | || ||||| | || |||| ||| ||| | | |||||||| | || || |||| Sbjct 232938 TCCCAGTCTTCAATCCAGCTTC--CCAACCGAAGAAATGCATGGACGTGAGCTT-CTCAG 232882 Query 203952 -CGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGA 204010 ||||| | ||||||||||| || |||||| || ||||| |||| | | ||| Sbjct 232881 GGGTTGGACT-GGCCATGTGAACATTGGTCGACTGGGACTGATCGATAAAAGCCCCTCGA 232823 Query 204011 TCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCT 204070 || || ||||| || | || || |||| | ||||||||| || || || ||| | Sbjct 232822 TCAGCAGCCATTTTCAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTACAGTGCC 232763 Query 204071 CTGGTGTGTTGAGGCACATCTTCCC---ACGTCCTGATCGAGCCGTTGTCGGCCATCAGT 204127 || ||| | || || ||| | || || |||||| || |||| || || | | Sbjct 232762 TTGATGTCTGCTGG--TATTTTCTCGATAC-TCTGGATCGACCCATTGTTCGCTATTA-T 232707 Query 204128 CTCA-TCCTCGTCTCCTCCCCCCACA-TGCCCAACCTGATCAGCTCCCGCACCAGGTGGG 204185 | | || || | || || |||| | | | | | | || ||| || || |||| Sbjct 232706 CAGATTCTTCATGTCGTCGTCCCAGAGATCGCGTTCAG-TGAGGTCCTTCAGGAGATGGG 232648 Query 204186 GGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATG 204245 | |||| || ||| || || || |||||||| | | || | | | |||| ||||| | | Sbjct 232647 GATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTAGG 232588 Query 204246 GTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCA 204305 | |||| ||||||||||| || | ||||| || || || || ||||| || |||| Sbjct 232587 GCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCA 232528 Query 204306 GGAGCAGGGAGTTGCGCACACCGT------ATTTTTGGACCCTGCGCTTCAGAGAGGTCC 204359 | ||||| ||||| | || |||| || ||| || || | || || || Sbjct 232527 GTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCC 232468 Query 204360 AGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419 || || | | | ||| | || |||||||||||| |||| | |||||| || |||| Sbjct 232467 AGAGGT---TTG---TCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGA 232414 Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479 |||| ||| ||||||||| |||| | ||||| || || | || || || Sbjct 232413 CTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCT 232354 Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 ||| ||| |||||| | |||||| |||||||| | ||| Sbjct 232353 CCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTT 232314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795115760302080