Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq2351 131 2e-25 >seq2351 Length=10305 Score = 131 bits (144), Expect = 2e-25 Identities = 282/422 (67%), Gaps = 0/422 (0%) Strand=Plus/Minus Query 53641 ACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATACGGCGTTCGCGG 53700 |||||||||| | |||||| ||| | ||| | ||||| |||| | || ||||| Sbjct 3010 ACCAGGCGCTGATACATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGG 2951 Query 53701 TTTTCTTCAGTGCCACGGTTATTCTTCAGTACAACGACGTCATCGAACTGGTAATGCCAC 53760 || |||| ||||||||| |||||||| || | | | || | | ||||||| Sbjct 2950 TTGCCTTCCACGCCACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCAC 2891 Query 53761 AGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGACTTGAGC 53820 || ||| || || ||||| || || || | |||||||| ||||| || || | Sbjct 2890 AGCGGGTAAAACAACGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACT 2831 Query 53821 GCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGCGA 53880 || || || || ||| || || ||| || || | || || |||||| Sbjct 2830 GCGGTCTGGAAATGTTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGA 2771 Query 53881 ATAGGACTGCCAATCCCACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGTTTGGAC 53940 || || || || | | |||| ||| ||| ||| || ||||||||| ||||| | || Sbjct 2770 ATCGGGCTACCCAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAA 2711 Query 53941 ACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTTTTG 54000 || || | ||||| | ||| || ||||| || || |||||| |||| || | Sbjct 2710 ACGTATTTCACGATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCA 2651 Query 54001 ATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAATCGGGGTG 54060 |||| || ||||| |||||||||||||| || ||||| || || | ||| ||||| || Sbjct 2650 ATCAACACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTT 2591 Query 54061 GG 54062 || Sbjct 2590 GG 2589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505466127636480