Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10 147 5e-30 seq676 127 5e-24 >seq10 Length=2352850 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||||| | ||| ||||| || ||||| |||| ||||||||| | | ||| Sbjct 820796 TCGAAGACGTAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGAGT 820737 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||| |||||||||| || || || |||||||||||||| || ||||| ||| |||||| Sbjct 820736 CCTGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCC 820677 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| ||| ||| ||| | ||||| | | ||||| || | Sbjct 820676 CTCTTTATCCTGGATCTTCGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAG 820617 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || |||||||| || Sbjct 820616 TGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAAATCTG 820578 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || ||||| |||||||| ||||| || |||| ||||| |||| | || Sbjct 820568 TCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGAGAGTGT 820509 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| |||| ||| || || |||||||| | |||||||||||| || ||| || Sbjct 820508 TCTCCCATCCTCCAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCC 820449 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| ||||| ||| || ||||| |||||| | | ||| || || | Sbjct 820448 CTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCGACTTCTAG 820389 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| |||||||| || ||||| || || || Sbjct 820388 GGTGATCGTCTTTCCCGTGAGGGTCTTCACGAATATCTG 820350 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | |||||| || || || || |||| ||||||||| | || ||| || ||||| Sbjct 820331 CAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCTGACAGAGTTCTGCCATC 820272 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| || || || |||||||| | |||||||||||| || ||| || || || Sbjct 820271 TTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 820212 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | ||||| | || || || || | ||||| || Sbjct 820211 CTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCCACTTCAAGTGTGATAGT 820152 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || | ||||||||| ||||| || Sbjct 820151 CTTACCAGTCAAAGTTTTCACGAAAATCTG 820122 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||||||||| || || ||||| || || | || || |||| | || Sbjct 818972 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 818913 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| || |||||||| || |||||||| ||||| |||||||| ||| ||||| Sbjct 818912 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCC 818853 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| || || ||| | ||||| | | || || ||||| Sbjct 818852 CTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGCCTCAACCTCCAA 818793 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || | |||||||| || || || Sbjct 818792 CGTAATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTG 818754 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||||||||| || || ||||| || || | || || |||| | || Sbjct 819656 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819597 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| || |||||||| || |||||||| ||||| |||||||| ||| ||||| Sbjct 819596 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCC 819537 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| || || ||| | ||||| | | || || |||| Sbjct 819536 CTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAG 819477 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || ||||| || || || Sbjct 819476 GGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTG 819438 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || ||||| |||||||| ||||| || |||| ||||| |||| | || Sbjct 821024 TCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGAGAGTGT 820965 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| |||| || || || |||||||| | |||||||||||| || |||||| Sbjct 820964 TCTCCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCC 820905 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| || || ||| | ||||| | | ||||| |||| Sbjct 820904 CTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCTACTTCCAG 820845 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || ||||| || || Sbjct 820844 TGTGATGGTCTTCCCAGTCAATGTCTTTACAAAGATCTG 820806 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || || || || |||| ||||||||| | |||||| || |||||| Sbjct 821242 AGAACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTTCTACCATCT 821183 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || || || || ||||| | |||||| || || ||| ||| || || ||| Sbjct 821182 TCCAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGAATGCCCTCCTTGTCC 821123 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| ||| | ||||| | | ||||| || | ||||| ||| Sbjct 821122 TGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTC 821063 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| || ||||| || Sbjct 821062 TTGCCAGTTAGGGTTTTGACGAAAATCTG 821034 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||||||||| || || ||||| || || | || || |||| | || Sbjct 819200 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819141 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| || |||||||| || |||||||| | ||| |||||||| ||| ||||| Sbjct 819140 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCC 819081 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| || || ||| | ||||| | | || || |||| Sbjct 819080 CTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAG 819021 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || ||||| || || || Sbjct 819020 GGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTG 818982 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||||||||| || || ||||| || || | || || |||| | || Sbjct 819428 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819369 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| || |||||||| || |||||||| | ||| |||||||| ||| ||||| Sbjct 819368 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCC 819309 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| || || ||| | ||||| | | || || |||| Sbjct 819308 CTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAG 819249 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || ||||| || || || Sbjct 819248 GGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTG 819210 >seq676 Length=265522 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| | ||| ||||| || ||||| |||| |||||| |||| | ||| Sbjct 177650 CGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTG 177709 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| || ||||||||||| |||||||| || | ||||||||| || |||||| Sbjct 177710 CGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCC 177769 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || |||||| |||| |||||| | | || || || | Sbjct 177770 TCCTTGTCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCAAGG 177829 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || || ||||| Sbjct 177830 GTTATGGTCTTTCCTGTGAGGGTCTTGACGAATATTTG 177867 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| | ||| || || || ||||| || | |||||| |||| | ||| Sbjct 177422 CGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTG 177481 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| || ||||||||||| |||||||| || | ||||||||| || |||||| Sbjct 177482 CGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCGGGGGGAATTCCC 177541 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || |||||| |||| |||||| | | || || || | Sbjct 177542 TCCTTATCCTGGATTTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGG 177601 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || ||||| Sbjct 177602 GTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTG 177639 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| | ||| || || || ||||| || | |||||| |||| | ||| Sbjct 177878 CGAAGTCGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTG 177937 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| || ||||||||||| |||||||| | | ||||||||| || |||||| Sbjct 177938 CGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCC 177997 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| |||||| | | || || || | Sbjct 177998 TCCTTATCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGG 178057 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || ||||| Sbjct 178058 GTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATTTG 178095 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| | ||| ||||| || ||||| |||| |||||| |||| | ||| Sbjct 178106 CGAAGTCGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTG 178165 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| || ||||||||||| |||||||| || | ||||||||| || |||||| Sbjct 178166 CGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCC 178225 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || |||||| || | |||||| | | || || || | Sbjct 178226 TCCTTGTCCTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAGGCCTCGACCTCAAGG 178285 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || || || || Sbjct 178286 GTTATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTG 178323 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| |||||||| ||||||||| | || |||||| | ||| | | ||||||||| |||| Sbjct 177745 ACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATCCA 177686 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||| || |||||||||||| | || | ||||||| Sbjct 177685 GAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCG 177650 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| |||||||| ||||||||| | || |||||| | ||| | | ||||||||| |||| Sbjct 178201 ACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATCCA 178142 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||| || |||||||||||| | || | ||||||| Sbjct 178141 GAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCG 178106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178861663625856