Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_014260.1
Length=172253
Score E
Sequences producing significant alignments: (Bits) Value
seq2351 147 2e-30
>seq2351
Length=10305
Score = 147 bits (162), Expect = 2e-30
Identities = 284/419 (68%), Gaps = 0/419 (0%)
Strand=Plus/Minus
Query 144908 CATCAGGTCATTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCC 144967
|||||| | |||||||| | ||||| || | || || | ||||| | || |||||
Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937
Query 144968 CTTGTTATTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 145027
||| || ||||| || ||||| |||| ||||||| |||||| | || ||| |
Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877
Query 145028 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 145087
|| || || ||||| || | || || ||||| || ||||| || || |||||||||||
Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817
Query 145088 TTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTC 145147
||| |||| |||||| || ||||| ||||||| || ||| | |||
Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAG 2757
Query 145148 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 145207
|||||||| ||| |||| || || ||||| ||||| | |||| ||||| | ||
Sbjct 2756 CGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGAT 2697
Query 145208 CGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGA 145267
| | | || |||||| || | ||| |||||| ||||| | ||| || ||
Sbjct 2696 AGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGA 2637
Query 145268 ACTAAATTGGCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCAACGAAACCT 145326
|| || || || || || |||||| | || | ||| || || || ||||| |||| ||
Sbjct 2636 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCT 2578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551054266352640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |