Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq2351 147 2e-30 >seq2351 Length=10305 Score = 147 bits (162), Expect = 2e-30 Identities = 284/419 (68%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 144908 CATCAGGTCATTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCC 144967 |||||| | |||||||| | ||||| || | || || | ||||| | || ||||| Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 144968 CTTGTTATTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 145027 ||| || ||||| || ||||| |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 145028 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 145087 || || || ||||| || | || || ||||| || ||||| || || ||||||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 145088 TTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTC 145147 ||| |||| |||||| || ||||| ||||||| || ||| | ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAG 2757 Query 145148 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 145207 |||||||| ||| |||| || || ||||| ||||| | |||| ||||| | || Sbjct 2756 CGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGAT 2697 Query 145208 CGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGA 145267 | | | || |||||| || | ||| |||||| ||||| | ||| || || Sbjct 2696 AGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGA 2637 Query 145268 ACTAAATTGGCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCAACGAAACCT 145326 || || || || || || |||||| | || | ||| || || || ||||| |||| || Sbjct 2636 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551054266352640