Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq10 134 5e-26
seq162 104 9e-17
seq14 102 3e-16
seq3563 93.3 2e-13
>seq10
Length=2352850
Score = 134 bits (148), Expect = 5e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| ||||| ||| ||||||| ||||| || || || || || ||| ||||
Sbjct 819890 AATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATC 819949
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| | ||||| |||||||||||||| ||||| || || || |||||
Sbjct 819950 TGACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCA 820009
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| ||||| || ||| | || |||||| | || || ||||||||| | | || || ||
Sbjct 820010 ACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAA 820069
Query 391229 TATTGATAAGGA 391240
||| | || ||
Sbjct 820070 CATTCAAAAAGA 820081
Score = 104 bits (114), Expect = 9e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | || ||||| ||||| ||||||| || || ||||| | || ||||| |
Sbjct 818748 ATTATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATTACGTTGGAGGTTGAGGCT 818807
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
||||| | |||||| | | ||| || || || || || || ||||| ||||| ||
Sbjct 818808 TCTGACACAATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCTCCAGAC 818867
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226
|| |||||| | || ||| | || || || || || ||||| ||||| | | ||||||
Sbjct 818868 CAGCAACGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTAT 818927
Query 391227 AATATTGATAAGGATGCAACACTTCAC 391253
|||||| | || || | || ||||||
Sbjct 818928 AATATTCAGAAAGAGTCCACCCTTCAC 818954
Score = 100 bits (110), Expect = 1e-15
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || || || |||||||| || || || || || || || || | ||
Sbjct 820574 AATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACCATCACACTCGAAGTAGAGGCCTC 820633
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| | || || || || ||||| || ||||||||||| || ||
Sbjct 820634 TGACACAATTGAAAACGTCAAGGCGAAGATCCAGGATAAAGAGGGAATTCCTCCAGACCA 820693
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||||| | || ||| | || |||||| | |||||||| || ||| | | || || ||
Sbjct 820694 ACAACGTCTCATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTCTCAGACTACAA 820753
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || || ||||| ||
Sbjct 820754 CATCCAGAAGGAATCCACTCTGCACTTGGT 820783
Score = 98.7 bits (108), Expect = 4e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||||| || || || || || || || || | |||
Sbjct 818979 ATGCAGATCTTCGTGAAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCT 819038
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| || || || || || || ||||| ||||| || ||
Sbjct 819039 GACACAATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 819098
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| | || || || || || ||||| ||||| | | |||||||||
Sbjct 819099 CAACGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAAT 819158
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | || || | || ||||||
Sbjct 819159 ATTCAGAAAGAGTCCACCCTTCAC 819182
Score = 98.7 bits (108), Expect = 4e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||||| || || || || || || || || | |||
Sbjct 819207 ATGCAGATCTTCGTGAAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCT 819266
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| || || || || || || ||||| ||||| || ||
Sbjct 819267 GACACAATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 819326
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| | || || || || || ||||| ||||| | | |||||||||
Sbjct 819327 CAACGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAAT 819386
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | || || | || ||||||
Sbjct 819387 ATTCAGAAAGAGTCCACCCTTCAC 819410
Score = 93.3 bits (102), Expect = 2e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||||| || || || || || || || || | |||
Sbjct 819435 ATGCAGATCTTCGTGAAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCT 819494
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| || || || || || || ||||| ||||| || ||
Sbjct 819495 GACACAATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 819554
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | || ||| | || || || || || ||||| ||||| | | |||||||||
Sbjct 819555 CAACGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAAT 819614
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | || || | || ||||||
Sbjct 819615 ATTCAGAAAGAGTCCACCCTTCAC 819638
>seq162
Length=620880
Score = 104 bits (114), Expect = 9e-17
Identities = 129/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
||||||| ||||| || || ||| | | | ||||| | ||||||| | |||
Sbjct 49778 AAAATGAGGGAAACCGCCGAGGGCTATTTGAATACGCCAGTGAAGAATGCAGTTGTCACT 49837
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || || |||||||| ||| | || ||||||||||||||||||| || || ||||||
Sbjct 49838 GTCCCAGCGTATTTCAACGATTCTCAGAGGCAAGCAACTAAAGATGCTGGTCAAATTGCT 49897
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
||| | || || || ||| | || || ||||| || || || || || || ||||||
Sbjct 49898 GGTCTCAACGTCCTCCGAGTCATCAACGAACCGACGGCTGCCGCACTTGCCTATGGA 49954
>seq14
Length=2234412
Score = 102 bits (112), Expect = 3e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || ||||| || || || || || || || || | |||
Sbjct 1933398 ATGCAGATCTTCGTAAAAACCCTAACTGGGAAGACCATCACCCTCGAGGTGGAGGCTTCT 1933457
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | | ||| |||||||| || ||||| || ||||| || || ||
Sbjct 1933458 GACACAATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 1933517
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | |||||| | || ||||| || || |||||| | || || | ||||| ||
Sbjct 1933518 CAGAGGCTGATTTTCGCTGGTAAACAGCTCGAGGATGGACGCACCCTGTCTGATTACAAC 1933577
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGA 391265
||| | ||||| | ||||||||||| ||| | |||
Sbjct 1933578 ATTCAGAAGGAATCGACACTTCACTTGGTACTCAGA 1933613
>seq3563
Length=5470
Score = 93.3 bits (102), Expect = 2e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|||||||| |||| |||||| | || | ||| | || ||||| || || || ||
Sbjct 3917 AAAATGAAGAAAACGGCAGAAGACTACCTCGGTGAAACTGTCACTGAAGCGGTTATCACC 3858
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || || ||||| || ||||| ||||| || ||||| ||||||||||| | || ||
Sbjct 3857 GTGCCGGCGTATTTTAACGATGCGCAACGTCAGGCAACCAAAGATGCAGGCCGCATCGCA 3798
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
||| | | || || || || |||||||| ||||| ||||| || || || || ||
Sbjct 3797 GGTCTGGAAGTAAAACGTATCATCAATGAACCGACAGCGGCTGCGCTGGCGTACGGTCT 3739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975617954476544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |