Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq2351 149 7e-31 >seq2351 Length=10305 Score = 149 bits (164), Expect = 7e-31 Identities = 297/436 (68%), Gaps = 8/436 (2%) Strand=Plus/Minus Query 141467 GCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAACACAAT 141526 ||| ||||| | |||||| | ||||| |||| || || ||||||||||| ||| | Sbjct 2975 GCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCCACGGTTGTTCTTCAGCACCAG 2916 Query 141527 CAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAACCTTTACGAAT 141586 || | |||||||||| || ||||||| ||| | |||| ||||||| || || | Sbjct 2915 CAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAACGTTGCCGCTCCGCCGCGCAC 2856 Query 141587 ACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAAGGTACTAC-GC 141645 ||| || || || ||| | | || || | | || || || ||||||| | ||| || Sbjct 2855 ACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATGTTTATAGAAAGGAA-TACAGC 2797 Query 141646 CAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAATCATGCCTGCGT 141705 |||| || |||| || || ||| ||| || ||||| || |||| Sbjct 2796 CAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAGCGCACGAATACGACCGGCGT 2737 Query 141706 TAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCA---GAGTTTGCATCAT 141762 |||| |||||||| || |||| ||||| || || || |||||| ||| | || | | Sbjct 2736 TAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGATAGCACTGGAGGTGGCGTTAA 2677 Query 141763 TGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAATTGACGAGTTG 141822 || || || |||||||| || | ||||| | || || || ||||| ||||| |||| Sbjct 2676 TG---GAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGAGCTGAACTGACGGGTTG 2620 Query 141823 GGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTACGAGTTGAAACAGCTT 141882 ||||||| || || | ||| || || || ||||| || || || || |||| || | Sbjct 2619 GGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCTTGAAGGTAGAAATCGCGT 2560 Query 141883 CATAAAATTCTTTGAC 141898 |||| || |||||| Sbjct 2559 CATAGAAGCGTTTGAC 2544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524943561507840