Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3099 111 2e-19 >seq3099 Length=8203 Score = 111 bits (122), Expect = 2e-19 Identities = 282/423 (67%), Gaps = 16/423 (4%) Strand=Plus/Minus Query 15836 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 15895 || ||||| ||| || || |||||| || ||| || | || ||| ||||| || Sbjct 7101 CAGGATCTGCTCACGACCACGAACATCCGGCAGACTAACCACTACCTGACGGTCAAAACG 7042 Query 15896 ACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAAC 15955 || || || || | || ||||| | ||| || || || ||||| || || | Sbjct 7041 GCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGTGGCGGCAATCACGAT 6982 Query 15956 AATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTC 16015 ||| ||| | | ||||||||||||||||| || | |||||| | |||||||| Sbjct 6981 AATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTGGTTCAGGGTTTGTTC 6922 Query 16016 CCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCT 16074 |||||||||| | || | ||| |||| ||||| || |||||||| || | Sbjct 6921 ACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGACCGACGGCATCGATTT 6863 Query 16075 CATCAATGAAGACGATGCATGG------TTGATTTTCGCGAGCGACTTCAAAGAGATCCC 16128 |||||||||||| ||| || || || ||||||| || || || | || | Sbjct 6862 CATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC----TCGAACATGTCAC 6809 Query 16129 GTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-G 16187 | ||||| || || ||||| || ||||| || ||||||| | ||||| || | | Sbjct 6808 GCACACGAGATGCACCGACACCCACGAACATTTCAACAAAGTCAGAACCGGAA-ATGGTG 6750 Query 16188 ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCT 16247 | ||| || || || | |||||| ||||| || ||| || || || ||||| || || Sbjct 6749 AAGAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTTTTACCTGTTCCC 6690 Query 16248 GGC 16250 ||| Sbjct 6689 GGC 6687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620711611176960