Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14 192 7e-44 seq3099 104 3e-17 >seq14 Length=2234412 Score = 192 bits (212), Expect = 7e-44 Identities = 587/895 (66%), Gaps = 18/895 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | |||||||| || | | || || ||||||| ||| || || || || Sbjct 232606 TAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGAT 232547 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||||||||||| | ||| ||| | | || | || || ||| Sbjct 232546 GCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCC 232487 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTT----GGTTTCACCTTCCCACATATCAAATTG 106110 ||||| | ||||||| || || || ||| | || ||||||| || | || Sbjct 232486 TTGAGTTTAGCCCAGTCCCAG---AGGTTTGTCGGTGTGACAC-CCCACATGTCGTACTG 232431 Query 106111 AAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 || | || ||| ||| | ||| || | | ||||| || | ||| | ||| Sbjct 232430 GAGGATGCCCTGGCTGACTGGCGAG--CCTTTGTACGTCTCGTAAGTACCCTTCTCTTGG 232373 Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 || | ||||||| |||||||||| | | || | ||| || ||||| | || Sbjct 232372 GCGAGTTCACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTG 232313 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | | || ||| ||||| || |||| || || || | ||| |||| || ||| Sbjct 232312 AGTTTCTGGGCCTCATCACTGTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGA 232253 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 106348 || ||||| || | || || || | ||||| ||| || || || || |||||| Sbjct 232252 CCCTGAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACT 232193 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATT-T 106406 ||||| |||| ||| ||||| | || |||||| |||| |||| ||||| || | | Sbjct 232192 GGATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGACAA-CTTTGACGACTGT 232134 Query 106407 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 106466 | ||| |||| || | ||| | || || || || ||| || | | || | Sbjct 232133 CTTGA-GTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGACTGCTA 232075 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | |||||||||||||| ||||| ||||| | |||||| | || || || | Sbjct 232074 TCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGC 232015 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 |||||||| | || || || || | ||||| || || || ||||||| |||| Sbjct 232014 ACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCAT 231955 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 ||||||| ||||||||||| || || ||||| |||||| | |||||||| |||||| Sbjct 231954 CCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACA 231895 Query 106647 CATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 || |||||| || || || ||| || ||||| |||||||||||||||| || Sbjct 231894 GCTCACGGGCTGGCAC-TTGACGCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGC 231836 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 || || ||||||||| | ||| |||| ||||| || || || || | | | Sbjct 231835 TTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAA 231776 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 ||| |||| | ||| || || |||||||| | || || |||||||||| Sbjct 231775 CTCCAGGGACCGTCTGCCTTGACACGTTTCATGAACAAATCGGGTATCCACAGGG 231721 Score = 192 bits (212), Expect = 7e-44 Identities = 587/895 (66%), Gaps = 18/895 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | |||||||| || | | || || ||||||| ||| || || || || Sbjct 776159 TAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGAT 776100 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||||||||||| | ||| ||| | | || | || || ||| Sbjct 776099 GCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCC 776040 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTT----GGTTTCACCTTCCCACATATCAAATTG 106110 ||||| | ||||||| || || || ||| | || ||||||| || | || Sbjct 776039 TTGAGTTTAGCCCAGTCCCAG---AGGTTTGTCGGTGTGACAC-CCCACATGTCGTACTG 775984 Query 106111 AAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 || | || ||| ||| | ||| || | | ||||| || | ||| | ||| Sbjct 775983 GAGGATGCCCTGGCTGACTGGCGAG--CCTTTGTACGTCTCGTAAGTACCCTTCTCTTGG 775926 Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 || | ||||||| |||||||||| | | || | ||| || ||||| | || Sbjct 775925 GCGAGTTCACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTG 775866 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | | || ||| ||||| || |||| || || || | ||| |||| || ||| Sbjct 775865 AGTTTCTGGGCCTCATCACTGTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGA 775806 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 106348 || ||||| || | || || || | ||||| ||| || || || || |||||| Sbjct 775805 CCCTGAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACT 775746 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATT-T 106406 ||||| |||| ||| ||||| | || |||||| |||| |||| ||||| || | | Sbjct 775745 GGATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGACAA-CTTTGACGACTGT 775687 Query 106407 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 106466 | ||| |||| || | ||| | || || || || ||| || | | || | Sbjct 775686 CTTGA-GTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGACTGCTA 775628 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | |||||||||||||| ||||| ||||| | |||||| | || || || | Sbjct 775627 TCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGC 775568 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 |||||||| | || || || || | ||||| || || || ||||||| |||| Sbjct 775567 ACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCAT 775508 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 ||||||| ||||||||||| || || ||||| |||||| | |||||||| |||||| Sbjct 775507 CCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACA 775448 Query 106647 CATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 || |||||| || || || ||| || ||||| |||||||||||||||| || Sbjct 775447 GCTCCCGGGCTGGCAC-TTGACGCTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGC 775389 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 || || ||||||||| | ||| |||| ||||| || || || || | ||| Sbjct 775388 TTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAGA 775329 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 ||| |||| | || || || |||||||| | || || |||||||||| Sbjct 775328 CTCCAGGGACCGTCTGCCAGGACACGTTTCATGAACAAATCGGGTATCCACAGGG 775274 >seq3099 Length=8203 Score = 104 bits (114), Expect = 3e-17 Identities = 283/426 (66%), Gaps = 22/426 (5%) Strand=Plus/Minus Query 9143 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 9202 || ||||| ||| || || |||||| || ||| || | || ||| ||||| || Sbjct 7101 CAGGATCTGCTCACGACCACGAACATCCGGCAGACTAACCACTACCTGACGGTCAAAACG 7042 Query 9203 ACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAAC 9262 || ||||| || | || ||||| | ||| || || || ||||| || || | Sbjct 7041 GCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGTGGCGGCAATCACGAT 6982 Query 9263 AATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTG 9319 ||| ||| ||||| ||||||||||||||||| || | ||||| | ||||| Sbjct 6981 AATGCCT---TCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTGGTTCAGGGTTTG 6925 Query 9320 TTCCCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAA 9378 ||| |||||||||| | || | ||| |||| ||||| || |||||||| | Sbjct 6924 TTCACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGACCGACGGCATCGA 6866 Query 9379 TCTCATCAATGAAGACAATACATGG------TTGATTTTCGCGGGCGATTTCAAAGAGAT 9432 | ||||||||||||| ||||| || || ||||||| || || || | | Sbjct 6865 TTTCATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC----TCGAACATGT 6812 Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492 | || || | || || ||||| || ||||| || ||||||| | ||||| || Sbjct 6811 CACGCACACGAGATGCACCGACACCCACGAACATTTCAACAAAGTCAGAACCGGAA-ATG 6753 Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551 | || ||| || || || | |||||| ||||| || ||| || || || ||||| || Sbjct 6752 GTGAAGAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTTTTACCTGTT 6693 Query 9552 CCTGGC 9557 || ||| Sbjct 6692 CCCGGC 6687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589951536952320