Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq2351 156 5e-33 >seq2351 Length=10305 Score = 156 bits (172), Expect = 5e-33 Identities = 293/425 (69%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 141347 CATCAGGTTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 141406 |||||| || |||||||| || || || || | || | | |||||| |||| ||||| Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 141407 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGC 141466 |||||||||||| || || | |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 141467 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATG 141526 || || || ||||| || | || || ||||| |||||||| || || || |||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 141527 TTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACC 141583 ||| |||| |||||| |||||||| ||||||| |||| ||| ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACC---ACCGCGAATCGGGCTACC 2760 Query 141584 TTCAGCACGAATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTGATA--TATTCG 141641 |||||||| || |||| || |||||||| || |||| ||| | |||| Sbjct 2759 CAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATTTC 2702 Query 141642 ATGATTGAATTGGCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGC-TTCGATAACCAC 141700 | ||| | | ||| ||| || || || | |||| ||| || || || || | ||| Sbjct 2701 ACGATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTC-GCCGCACTCAATCAACAC 2643 Query 141701 ACAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGA 141760 ||||| |||||||| ||||| || || | |||| | |||||| || || ||||| || Sbjct 2642 GCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGA 2583 Query 141761 AACCT 141765 || || Sbjct 2582 AATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541557137433600