Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_014792.1
Length=169285
Score E
Sequences producing significant alignments: (Bits) Value
seq2351 156 5e-33
>seq2351
Length=10305
Score = 156 bits (172), Expect = 5e-33
Identities = 293/425 (69%), Gaps = 12/425 (3%)
Strand=Plus/Minus
Query 141347 CATCAGGTTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 141406
|||||| || |||||||| || || || || | || | | |||||| |||| |||||
Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937
Query 141407 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGC 141466
|||||||||||| || || | |||| ||||||| |||||| | || ||| |
Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877
Query 141467 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATG 141526
|| || || ||||| || | || || ||||| |||||||| || || || ||||||||
Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817
Query 141527 TTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACC 141583
||| |||| |||||| |||||||| ||||||| |||| ||| |||
Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACC---ACCGCGAATCGGGCTACC 2760
Query 141584 TTCAGCACGAATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTGATA--TATTCG 141641
|||||||| || |||| || |||||||| || |||| ||| | ||||
Sbjct 2759 CAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATTTC 2702
Query 141642 ATGATTGAATTGGCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGC-TTCGATAACCAC 141700
| ||| | | ||| ||| || || || | |||| ||| || || || || | |||
Sbjct 2701 ACGATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTC-GCCGCACTCAATCAACAC 2643
Query 141701 ACAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGA 141760
||||| |||||||| ||||| || || | |||| | |||||| || || ||||| ||
Sbjct 2642 GCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGA 2583
Query 141761 AACCT 141765
|| ||
Sbjct 2582 AATCT 2578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541557137433600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |