Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq3532 91.5 2e-13 >seq3532 Length=11862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27985 GTAAAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACG 28044 || |||||||| | || || || ||||| ||||||||||| | || || || | || Sbjct 11163 GTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATGAGTTGAAACGCACT 11222 Query 28045 GCATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCT 28104 ||||||||||| || || || ||||| || ||||||||||| || ||| | |||||| Sbjct 11223 GCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGTGTTTTACCGCATCT 11282 Query 28105 TCTAAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTTCAAC 28157 || | ||||| || || || || || | ||||| |||||||| || Sbjct 11283 TCCAGCGTTTCACGGCGCAGAACGTTCACGTTCAGGTGTTGCCCCCCTTCCAC 11335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752567470801920