Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015269.1 Length=118351 Score E Sequences producing significant alignments: (Bits) Value seq3176 149 5e-31 >seq3176 Length=18404 Score = 149 bits (164), Expect = 5e-31 Identities = 145/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 27375 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTG 27434 ||||||| | |||||| || ||||| |||||||||| | ||| ||||| ||||| | Sbjct 6314 ATTACATTGACTGAGTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCG 6373 Query 27435 CGTTAAATCGAACAGCATAGCCAGAGACACGGATAGTCAATTGAGGATATTTTTCAGGAT 27494 ||| || || || ||||| ||||| |||||||| ||||| || ||||||||||| || | Sbjct 6374 AGTTGAAGCGCACGGCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGT 6433 Query 27495 GTTTCTGTGCATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCAC 27554 ||| | |||||||| ||| |||||| | | ||| || || || ||||| ||||||| Sbjct 6434 GTTCCATGGCATCCAACAGCATTTCACGGTTCATCACGTTCACGTTCAGGTGTTGACCAC 6493 Query 27555 CTTCGAT 27561 ||||||| Sbjct 6494 CTTCGAT 6500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378580090981376