Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq110 87.8 2e-12
seq2377 84.2 3e-11
>seq110
Length=1639951
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/149 (74%), Gaps = 4/149 (3%)
Strand=Plus/Minus
Query 153845 GATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGT--GAAGGTAATAAAGCATACAGA 153902
||| || |||||||| | ||| |||| ||| | || || || |||| ||||||
Sbjct 787512 GATGCCAGGCAGAATGATCGGT--GTCACCAGAGACGCAGATGGAAAGGAAGCGTACAGA 787455
Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962
| || || || || ||||||| || ||||| || ||||| || ||||| |||||||||
Sbjct 787454 CTGGCCCTCCAAACGCGAGAGCAACACATCAGAAGGGACAAGGCCACCAGCAACATCTGC 787395
Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTC 153991
||||| || ||| | ||||| || |||||
Sbjct 787394 ACAGCCCAAGCATTACTGGCGAACATGTC 787366
>seq2377
Length=23486
Score = 84.2 bits (92), Expect = 3e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922
|| || || |||||| | || || || || || || ||||| | |||| | |||| |
Sbjct 15106 CTCTCCTGCATTATGGTGACCTATCCTTCCACGCACGGTGTCTATGAAGAGACCATTCGT 15047
Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
| | ||| |||| || ||| | | || || ||||| ||||| ||||| || || |
Sbjct 15046 GAAGTGTGTCAGATTGTCCATCAACACGGCGGACAGGTGTATCTGGATGGCGCCAACATG 14987
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
|| ||||||||||| | | | || | | ||| || ||||| | || || |||
Sbjct 14986 AACGCACAGGTAGGTATCACCACGCCGGGCTACATTGGCGCGGATGTGTCGCACCTTAAC 14927
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086
|||||||||| ||||| ||||| || || || || || || ||
Sbjct 14926 CTACATAAAACGTTCTGCATTCCGCACGGTGGCGGCGGGCCGGG 14883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579184071045120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |