Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq110 102 1e-16 seq2377 100 3e-16 >seq110 Length=1639951 Score = 102 bits (112), Expect = 1e-16 Identities = 114/149 (77%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 158520 GATACCTGGCAGAATTGTAGGTCAGTCAGTAGATA-GC-GAAGGTAATAAAGCATACAGA 158577 ||| || |||||||| | ||| |||| ||| | || || || || |||| |||||| Sbjct 787512 GATGCCAGGCAGAATGATCGGT--GTCACCAGAGACGCAGATGGAAAGGAAGCGTACAGA 787455 Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637 | || || || || ||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct 787454 CTGGCCCTCCAAACGCGAGAGCAACACATCAGAAGGGACAAGGCCACCAGCAACATCTGC 787395 Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTC 158666 ||||| |||||| | ||||| || ||||| Sbjct 787394 ACAGCCCAAGCATTACTGGCGAACATGTC 787366 >seq2377 Length=23486 Score = 100 bits (110), Expect = 3e-16 Identities = 299/459 (65%), Gaps = 2/459 (0%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCAT 159363 || |||||| | || | ||||| |||||||| || || | ||||| | |||||| Sbjct 15340 CAGCCTAACTCGGGTGCGCAGGGCGAGTATGCCGGTTTGCTGGCAATTCGCCGCTACCAT 15281 Query 159364 CAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACT 159423 | | ||| || ||| | | | | ||| |||| ||| || || || || ||| Sbjct 15280 GAGAGCCGAGGTGACGATCAGCGCACGCTGTGTCTGATTCCAAGCTCTGCGCACGGCACT 15221 Query 159424 AATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGAT 159483 || || ||||| ||| |||||| |||||| || | || || |||||| | | Sbjct 15220 AACCCGGCATCGGCACAGATGGCCGGGATGGCGGTAGAAGTGGTGGCGTGTGACAAACAA 15161 Query 159484 GGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAAT-CATGAATACATTTGAACTGTC 159542 || || || || | | ||||| | |||| || || | | | | || || Sbjct 15160 GGGAATATCGATCTGCACGATCTGCGGGAGAAGGCCGCGCAGGCGGGCGATCGC-CTCTC 15102 Query 159543 ATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGAT 159602 || |||||| | || ||||| || || || ||||| | |||| | ||| | | | Sbjct 15101 CTGCATTATGGTGACCTATCCTTCCACGCACGGTGTCTATGAAGAGACCATTCGTGAAGT 15042 Query 159603 ATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGC 159662 ||| ||||||| ||| | | || || ||||| ||||| ||||| || || | || || Sbjct 15041 GTGTCAGATTGTCCATCAACACGGCGGACAGGTGTATCTGGATGGCGCCAACATGAACGC 14982 Query 159663 ACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACA 159722 |||||||||| | | | || | || ||| || ||||| | || || ||| |||| Sbjct 14981 ACAGGTAGGTATCACCACGCCGGGCTACATTGGCGCGGATGTGTCGCACCTTAACCTACA 14922 Query 159723 TAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 159761 ||| || ||||| ||||| || || || || || || || Sbjct 14921 TAAAACGTTCTGCATTCCGCACGGTGGCGGCGGGCCGGG 14883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588022032660480