Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq3629 82.4 1e-11 >seq3629 Length=1790 Score = 82.4 bits (90), Expect = 1e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 3490 AGGCTTTAAGCCCTCCATTATGTCCTCACAGCTTCGGTAGTTATATTTACCGAATGAGTT 3549 |||||||| ||||||| ||| || || || |||| ||| ||||||||||| |||||||| Sbjct 212 AGGCTTTACTCCCTCCAATATATCTTCGCAACTTCTGTATTTATATTTACCAAATGAGTT 271 Query 3550 ATATTGATTCTTTGGTGCTTTTAGTATTCGTTGTATTTCAGCAACCCT 3597 | |||| || ||||| || || || || || ||||| || | ||| Sbjct 272 AAATTGGTTTTTTGGGGCGTTAAGGTTTTTCTGGATTTCTGCTAGCCT 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97956984049408