Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10 125 5e-24 seq14 120 2e-22 seq676 116 2e-21 >seq10 Length=2352850 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| || |||||||| ||||| || ||| |||| |||| ||| Sbjct 819871 ACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGTTCGGCCATCTTCC 819812 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || || || || || |||||||||||| | || | ||||| ||||| Sbjct 819811 AACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 819752 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | | || | ||| |||||| || || | ||| ||||| ||| Sbjct 819751 ATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTT 819692 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | |||||||| ||||||||||| Sbjct 819691 CCAGTCAACGTCTTCACGAAGATCTGCAT 819663 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||||||||||| ||||| || |||||| ||| |||| || ||||| Sbjct 819638 GTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTG 819579 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || |||||||||||| | || | ||||| ||||| ||||| Sbjct 819578 CTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTT 819519 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | | || | ||| |||||| || || | ||| ||||| ||||| || Sbjct 819518 GGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGT 819459 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 | |||||||| ||||||||||| Sbjct 819458 CAACGTCTTCACGAAGATCTGCAT 819435 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||||||||||| ||||| || |||||| ||| |||| || ||||| Sbjct 819182 GTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTG 819123 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || | |||||||||||| | || | ||||| ||||| ||||| Sbjct 819122 CTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTT 819063 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | | || | ||| |||||| || || | ||| ||||| ||||| || Sbjct 819062 GGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGT 819003 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 | |||||||| ||||||||||| Sbjct 819002 CAACGTCTTCACGAAGATCTGCAT 818979 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||||||||||| ||||| || |||||| ||| |||| || ||||| Sbjct 819410 GTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTG 819351 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || | |||||||||||| | || | ||||| ||||| ||||| Sbjct 819350 CTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTT 819291 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | | || | ||| |||||| || || | ||| ||||| ||||| || Sbjct 819290 GGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGT 819231 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 | |||||||| ||||||||||| Sbjct 819230 CAACGTCTTCACGAAGATCTGCAT 819207 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||||||||||| ||||| || |||||| ||| |||| || ||||| Sbjct 818954 GTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTG 818895 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || |||||||||||| | || | ||||| ||||| ||||| Sbjct 818894 CTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTT 818835 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | | || | ||| |||||||| || | || ||||| || || || Sbjct 818834 GGCTTTGACATTTTCAATTGTGTCAGAAGCCTCAACCTCCAACGTAATGGTCTTGCCAGT 818775 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| |||||||||||| Sbjct 818774 CAAGGTTTTCACGAAGATCTGCATA 818750 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| |||| | || |||||||| | ||| ||||||||| ||||| ||||| | Sbjct 820347 TTCCTCCTCTCAGACGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCTG 820288 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || ||| |||| ||||| ||||| || || || || | || ||||||||| | | Sbjct 820287 ACAGAGTTCTGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGG 820228 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||||||||| ||||| |||||| | |||| ||| ||||| | Sbjct 820227 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCCA 820168 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || || || || || || | ||| ||||| || |||||||| Sbjct 820167 CTTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACGAAAATCTGCAT 820119 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||||||||| ||||| ||||| || | ||| |||| || Sbjct 821240 AACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTC 821181 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| ||||| || ||||| || | || || || ||| | || | ||||||||||| Sbjct 821180 CAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGAATGCCCTCCTTGTCCTG 821121 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | | || | ||| |||||| || |||| || ||||| || Sbjct 821120 GATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTT 821061 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || || || || |||||||| Sbjct 821060 GCCAGTTAGGGTTTTGACGAAAATCTGCAT 821031 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| || || || || || || ||| |||| |||| |||||| || || || Sbjct 820537 TCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAAG 820478 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||||||| | || | |||||||| || ||||| ||||| | Sbjct 820477 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTT 820418 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| ||| || || || | ||| || || ||||||||||| |||||||| Sbjct 820417 TCGATGGTGTCAGAGGCTTCGACTTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACG 820358 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 820357 AATATCTGCAT 820347 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| || || || || || || ||| |||| |||| ||||| || || || Sbjct 820993 TCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTCCAATTGTTTACCAGCGAAG 820934 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||||||| | || | ||||| ||||| ||||| |||||| | Sbjct 820933 ATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTT 820874 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| |||||| || || | || ||||| || || || | ||||| ||| Sbjct 820873 TCAATAGTGTCAGAGGCCTCTACTTCCAGTGTGATGGTCTTCCCAGTCAATGTCTTTACA 820814 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 820813 AAGATCTGCAT 820803 >seq14 Length=2234412 Score = 120 bits (132), Expect = 2e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||| ||||||||||| || || || ||| | ||| |||| || Sbjct 1933606 ACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCATCCTCG 1933547 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || || | ||||||||| | || | ||||||||||| | Sbjct 1933546 AGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1933487 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | ||| ||||| || |||| ||| ||||| | Sbjct 1933486 ATTTTGGCTTTGAC--ATTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATGGTCT 1933429 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || || || || || || ||||||||||| || Sbjct 1933428 TCCCAGTTAGGGTTTTTACGAAGATCTGCATGTT 1933395 >seq676 Length=265522 Score = 116 bits (128), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||| ||||| || || ||||| | ||| |||| || Sbjct 178118 ACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCCTCA 178177 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || |||| ||||||||| | || | ||||||||||| Sbjct 178178 AGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 178237 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || || || || || || | || |||||| || || | ||||||||| | Sbjct 178238 ATTTTAGCCTTCAC--ATTCTCAATGGTGTCGGAGGCCTCGACCTCAAGGGTTATGGTCT 178295 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| ||||| || |||||||||||| Sbjct 178296 TTCCTGTGAGGGTCTTGACGAAGATCTGCATA 178327 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||||||||| || || ||||| | ||| |||| || Sbjct 177890 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGTCCATCCTCA 177949 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || | || ||||||||| | || | |||||||| || Sbjct 177950 AGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGG 178009 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | || |||||| || |||| ||| ||||| | Sbjct 178010 ATCTTAGCCTTCAC--ATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCT 178067 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| ||||| || ||||| |||||| Sbjct 178068 TTCCTGTGAGGGTCTTGACGAAGATTTGCATA 178099 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||| ||||| || || ||||| | ||| |||| || Sbjct 177662 ACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCCTCA 177721 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || |||| ||||||||| | || | ||||||||||| Sbjct 177722 AGCTGCTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 177781 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || || || || || || | || |||||| || || | ||||||||| | Sbjct 177782 ATTTTAGCCTTCAC--ATTCTCGATGGTGTCGGAGGCCTCGACCTCAAGGGTTATGGTCT 177839 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| ||||| || || || |||||| Sbjct 177840 TTCCTGTGAGGGTCTTGACGAATATTTGCATA 177871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324617900719104