Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq320 82.4 9e-11 >seq320 Length=265502 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509 || || ||||| |||||||||||||||||||| || ||||| || ||||| || | ||| Sbjct 11396 TTCGACAAATCGACTTCTTCAACTGTCCAAAACGAGGCCTCAGCCTTTTTGTAAAATTTC 11337 Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATA 19569 || || || | ||| || || || | ||| ||||| ||| || ||||||| | Sbjct 11336 CAAATGTCTGGCCATTCAATTGGGAAGACAACGAATCTCCGAGGATTCTCCTTAAGAAGA 11277 Query 19570 GGTTCCATTT 19579 ||||||| || Sbjct 11276 GGTTCCAATT 11267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562080919403520