Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_016071.1 Length=145964 Score E Sequences producing significant alignments: (Bits) Value seq2955 336 2e-87 >seq2955 Length=1537 Score = 336 bits (372), Expect = 2e-87 Identities = 470/659 (71%), Gaps = 0/659 (0%) Strand=Plus/Minus Query 84888 GGCCTGACTGGTTGCGAACGTGCCACCGTGCCTGCGGGTTACGTTGGCGTAAAGGTTGAC 84947 || ||||||||||||||||| ||||||||||| ||||| || ||||| ||||| || || Sbjct 1236 GGGCTGACTGGTTGCGAACGCGCCACCGTGCCCGCGGGGTATGTTGGTGTAAAAGTAGAT 1177 Query 84948 CTGTATGGTGACGAAAAGGGTGTCCAGCAGCAAGAAGTTGGTGTTGGTAAGTATTGGTTG 85007 || || ||||||||||| || ||||||||||| ||||| || || ||||| || ||||| Sbjct 1176 CTCTACGGTGACGAAAAAGGCGTCCAGCAGCAGGAAGTGGGCGTGGGTAAATACTGGTTA 1117 Query 85008 ACCTGGAACGAAGAGATTTATCAGTTCCCGACATTCAACCAGTTGAATAACTACGAGCAG 85067 |||||||||||||| ||||| ||||| || || ||||||||| | | |||||||| || Sbjct 1116 ACCTGGAACGAAGACATTTACCAGTTTCCAACGTTCAACCAGCTACACAACTACGACAAG 1057 Query 85068 CCGTTCAACTTCCAGACCAAGGATTCGATGACGGTATCCGCTAAAATCGGTGTTGAATAC 85127 || |||| |||||||| || || ||| || || ||||| || ||||| Sbjct 1056 CCATTCACTTTCCAGACTGCTGACTCAATGGATGTGAAAGCCCGGATCGGCGTCGAATAT 997 Query 85128 TTTGTTGATCGCTCCAAGGTCACGAAGATTTTCCAGACCTACCGCAAAGGTGTTCAGGAA 85187 | || |||| ||||| || || || || |||||||||||||| || || | ||| Sbjct 996 TACGTCGATCCGGAGAAGGTGACCAAAATATTTCAGACCTACCGCAAGGGGGTGGACGAA 937 Query 85188 ATCACTGATGTAAACATTCGACAGAATATCTCGGATGCCTTGATCAAAGAAGCTGGCTCA 85247 ||||| || || ||| | || ||||| ||| || || ||||||| | |||| Sbjct 936 ATCACCGAGGTCAACTTGCGCCAGAACATCAGCGACGCGCTGATCAACCACTCTGGAAAG 877 Query 85248 ATGGACATTGGTACGCTGGCTGGTGATGGTAAGAGTCAGTTGCTTGAACGTGTTACCAAG 85307 ||||| || |||| || | | ||||| | ||||| || || | || || || Sbjct 876 ATGGATATCAACTCGCTCGCCGCAGGCGGTAAAACGCAGTTACTGGAGCTGGTCACACAG 817 Query 85308 CAGCTTAAGTCCAAGCTTGATCCGATTGGTATTGTGATTGTAAAACTGTCATATACCGAT 85367 | | || |||||||| || || || || || ||||||||| ||||||| | Sbjct 816 GACTTGAAATCCAAGCTCGACCCTATCGGCATCAGGATTGTAAAGCTGTCATGGGTCAGC 757 Query 85368 GACCTGATTTACCCACCGCAGGTAACAGCGTCAATCAACGCGAAGATCGAAGCAACTCAG 85427 |||||| ||||| | |||||| || ||| ||||||||||| |||||||| || ||| Sbjct 756 GACCTGGACTACCCGCAAAAGGTAAAAGAGTCCATCAACGCGAAAATCGAAGCCACCCAG 697 Query 85428 AAAGCTCTGCTGCGTGAGAACGAAATCCAGCAGACCAAGGCTGAAGCTCAGAAACAGATC 85487 || | ||||||| || |||||| ||| |||| |||||||| || ||| ||| Sbjct 696 CGCGCCTTATTGCGTGAAAATGAAATCGCGCAATCCAAAGCTGAAGCACAAAAAGCCATC 637 Query 85488 GAAGCCGCTCGCGGCGAAGCTGAATCTAAGCGTCTGCAAGCTCAGGGCGAGGCCGATGC 85546 ||| ||||| || ||||| || || | || | ||| | | ||| |||||||| Sbjct 636 GAACAGGCTCGTGGAGAAGCGGAGTCCACAATGCTACGGGCTAAAGCCGAAGCCGATGC 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466933638942720