Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_016165.1 Length=39283 Score E Sequences producing significant alignments: (Bits) Value seq3688 159 9e-35 >seq3688 Length=22785 Score = 159 bits (176), Expect = 9e-35 Identities = 738/1154 (64%), Gaps = 48/1154 (4%) Strand=Plus/Plus Query 16629 TGATCGAGGCGATCAAGGCCGAACTGACGACGAACGTCCGGCTGCAGTGCGATTTTCCTG 16688 || |||| || ||||||||||| ||| ||| |||||||| | || || || | Sbjct 6599 TGCTCGAAGCCATCAAGGCCGAGCTGGAATTCAACCCCCGGCTGCTGGCTGACTTCCCCG 6658 Query 16689 ACGCATTCGGCCAGGGGCGCCTGTGGCGCGAGGGCGAGATCGTCACGCGCAACAACATCC 16748 | || | |||| ||||||| | |||| |||| ||| | ||||||||| | ||| Sbjct 6659 AAGCCTGCGGCATGGGGCGCGTCTGGCAGATGGGCACCATCCTGACGCGCAACGATATCA 6718 Query 16749 GCGTCGAAG--GCCTGGGCGCCGCCAAGAAGATCCGTGGCCGCCGTCATGGCCCGTATCG 16806 || | | ||| ||| || || ||| | || |||| || || || ||||| || Sbjct 6719 AGGTGCAGGTGGCC--GGCAGCGGTAAAAAGCTGCGCGGCCTGCGCCACGGGCCGTACCG 6776 Query 16807 GCCCGATCTGCTGTTCCTGGACGACATCGAGAACGACGAACAGGTGCGCAGCCCCGAGCA 16866 || || ||| || | |||||||| || ||||||||||| ||||| |||| ||| || || Sbjct 6777 CCCTGACCTGGTGATACTGGACGATATTGAGAACGACGAGCAGGTACGCAACCCGGACCA 6836 Query 16867 GCGCACCAAGCTTTGGAACTGGATCTATCGCGCCGCGCTGAAGGTCGGCCCGCCCGACGG 16926 |||| |||||| |||||| | ||| |||| | | || | | || Sbjct 6837 GCGCGACAAGCTGGAAAACTGGCTGAGAAAAACCGTGCTGCCGCTGGGTGGTGCGGGCGC 6896 Query 16927 CAGCATGGATGTGATCTGGGTCGGCACGGTGTTGCACTTCGACGCCGT--TATCGTGCGC 16984 | | |||||| ||| ||||||| | |||| | |||| | || |||| ||| Sbjct 6897 AAAACTCGATGTGGTCTATATCGGCACCATCCTGCATTACGACTCGGTGTTATCA--CGC 6954 Query 16985 GCCGCGAAGGCGCCCGGATGGCGCGTGACCGAGTTCCAGGCGGTGGTGAAGTTCCCCGAC 17044 || ||| || |||||| | | || |||| || ||| | | Sbjct 6955 ACCCTGAATAACCCGCTATGGCGGCAGGCGCGCTTTAAGGCCCTGCGCCAGT-----GGC 7009 Query 17045 CGGATGGACCTGT------GGGACCGGTTCGAAGAGGTCTATCACAACGACGGCGAAGAC 17098 ||| || |||||| |||| | | || || || | ||| | || || || Sbjct 7010 CGG-TGAACCTGTCGTTGTGGGAGAGCTGGGAGCAGCGCTTGCGTAACCAGGGAGAGGAT 7068 Query 17099 GCGGCCAAGGCGTTTTACGAGGCGCGCAAGGCCGAGATGGATCAGGGCGCGGTGGTCAAC 17158 ||||| ||| ||||| | | | | |||||||||| | ||||||| ||| | Sbjct 7069 GCGGCGCAGGATTTTTATACGTCACACCGTACCGAGATGGAGGAAGGCGCGGAAGTCTCC 7128 Query 17159 TGGCCCTCGGTGCAGTCGCTGCTGTTCCTGATGCTGGAGCGCGCGGCCGACA---AAGCC 17215 ||| || | || |||||||| |||||||| ||||| ||| | ||| Sbjct 7129 TGGTCCGCACGGC---CGCTGCTGACCCTGATGCATATCCGCGCCCGTGACGGTCACGCC 7185 Query 17216 GCCTTCCAGACCGAATATCAGAACCAGCCGATCAGCGAGGGGAAC-----CCGTTTGGCG 17270 |||| | |||| || ||||| ||| |||||| | ||| | ||||| | Sbjct 7186 ACCTTTGATGCCGAGTACCAGAATGCCCCGGTCAGCG--GTGAAGATGCGCTGTTTGCCC 7243 Query 17271 ATCTGACCT--ATT---GGGTGCAGCCGCTGCGGGAATGGATCTTCTTCGGCGCGATCGA 17325 | ||| ||| ||| |||| | | ||| || ||| | |||| ||| || ||| Sbjct 7244 A-CTG-CCTGCATTTCTGGGTCAACCGGCTTAACGAGTGGCTTTTCTACGGGGCCTGCGA 7301 Query 17326 CCCGAGCCTTGGCAAGGCTGGCAAGGGGCGCGACCCGTCAGCAATCCTGATCGGCGGCTT 17385 ||| ||||| |||||||| || | || ||||||||||| | ||| |||| ||||| Sbjct 7302 CCCCAGCCTCGGCAAGGCCGGGGCCAGCCGTGACCCGTCAGCGCTGCTGGTCGGTGGCTT 7361 Query 17386 CGACCGGCTGGCCGGGAAGCTTGATGTGGTCGAAGCCTCGATCCGCAAGCGCCTGCCCGA 17445 | || |||| ||| |||||||| ||||| ||| |||||||| ||||| || Sbjct 7362 TAATCGCGCCACCGGCGTGCTGGATGTGGTGGAAGCGCAGATACGCAAGCGGCTGCCGGA 7421 Query 17446 TCTGATCATCGCCGACACGATCGCCCTGCAGCGCGAATATCGGGCGCTGATGTGGTTCGT 17505 || ||| | | | || || ||||| ||||| | ||| ||||| | | Sbjct 7422 CGCCATTATCAGCAATATTATTGCTCTGCAAAAGGAATACCACTGTCTGGTGTGGGGCAT 7481 Query 17506 TGAAACGGTTCAGTTTCAGGAGTTCCTGCGCACCGAGCTGATGACGCGGGCCGCCCGCGA 17565 ||| |||| |||||||||||||||||||||||||||||||| | ||| || || | | Sbjct 7482 TGAGGCGGTGCAGTTTCAGGAGTTCCTGCGCACCGAGCTGATTAAGCGCGCGGCAC-AGC 7540 Query 17566 TGGCGTTGGC--ATCTCGGCCGTGCCGATCACGCCCTCGGCCGACAAGGACCTGCGCATC 17623 ||| || | | |||| | | || | ||| ||||||||| |||| ||| Sbjct 7541 TGG-GTCACCCGGTGCCGGCGCGGGCTATTATCCCCCATGCCGACAAGCTGTTGCGTATC 7599 Query 17624 GAGCGCCTGCAGCCGCCGGTGGCTGCGGGGCTGATCCGGTTCAGCA--CCGCGCATCGCA 17681 ||| ||||||||| | ||| ||||| ||||| || ||| || || || Sbjct 7600 GAGACCCTGCAGCCCCATATGGAAAACGGGCTTATCCG--TCTGCACGCCAGCCAGACCA 7657 Query 17682 CGCTGATTGACCAGCTGCAGCAATGGCCGAACGGCGATCACGATGACGGGCCGGATGCGC 17741 | ||||| | ||||||| || | || || ||| || || ||||| ||||| |||| Sbjct 7658 CACTGATACAGCAGCTGCGCCACTTTCCCCGCGCCGACCATGACGACGGCCCGGACGCGC 7717 Query 17742 TCGACATGCTTTGG 17755 | | ||||| ||| Sbjct 7718 TGCATATGCTCTGG 7731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125578082481920