Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_016566.1 Length=44077 Score E Sequences producing significant alignments: (Bits) Value seq2728 100 8e-17 >seq2728 Length=1005 Score = 100 bits (110), Expect = 8e-17 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 27747 AACCAGCGGTCCGTGAACGCCTTATAGCTACTGCCGAGACGTTCGCCGCCGTCGACAAAC 27806 ||||||||| ||||| || | || ||| |||||||| | ||| ||||||||| Sbjct 205 AACCAGCGGGAAGTGAATGCGCCAAAGGTACGCCCGAGACGCTGGCCATGATCGACAAAC 146 Query 27807 CACGTCTGACCCCATAGGTCTTTCAGCCCGTTCGGTGCGGGTGTGCCAGTCAGGTTAATC 27866 || | ||| ||||| ||||| |||| |||||||| || || || || || || || ||| Sbjct 145 CATGACTGGCCCCACAGGTCGATCAGGCCGTTCGGCGCAGGCGTACCGGTGAGATTCATC 86 Query 27867 CAGCGCTTGACGTGCTTATGTGCGA 27891 ||||| | ||||||||||| |||| Sbjct 85 CAGCGGTGTACGTGCTTATGCGCGA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140918159623424