Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq88 118 9e-22
>seq88
Length=1565181
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 29880 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCC 29939
||| |||| ||| ||||| | || |||||| ||||||||| ||||| |||||||| ||
Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678
Query 29940 CATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29999
|||||| | | ||||| || ||||| |||||||||||||| ||| | |||||
Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738
Query 30000 ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 30059
| | |||||| || ||||||||||| | | |||| ||||||||||||||
Sbjct 328739 GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCGCA 328798
Query 30060 CACGATGATGCGCCTGTCTTCTGGGTTGTTCCT 30092
| ||||| | | ||| || || |||| |||
Sbjct 328799 GATTATGATCCTTCGGTCGTCCGGATTGTGCCT 328831
Score = 118 bits (130), Expect = 9e-22
Identities = 177/250 (71%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 30138 GTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACAC 30197
||||||||| ||||| ||||||| || || | || |||||||| ||||| || |
Sbjct 328971 GTAGTCTGCATGCATGTTAGTGTACTTGGCACCAGAGTGTCTCCACTGAAACCCATAGAT 329030
Query 30198 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGA 30257
|| || || || ||||| || | || || |||||| ||||| | || | ||
Sbjct 329031 TGGCCCTAGATCACCCTCCTCACGGTCCTTGAAGCCGTAAGCATCCAAGTATTCACGTGA 329090
Query 30258 ACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
| ||||||||||||||| || || || || || | || | || ||||||||| ||
Sbjct 329091 GCTGTTGGCGTCCCAGATTTTCACTCCTCGCTTTGATAATTCGTGGGCGTTTGTGGATCC 329150
Query 30318 TCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30377
|||| |||||| || || || ||||| || ||||||| |||||| || || |||||
Sbjct 329151 ACTGATGAACCAGAGGAGTTCTTCCACTACTCCCTTCCAGAAGACCGATTTCGTGGTGAG 329210
Query 30378 GAG-GGGAAA 30386
|| ||||||
Sbjct 329211 AAGTGGGAAA 329220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408597839252864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |