Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq2351 152 5e-32 >seq2351 Length=10305 Score = 152 bits (168), Expect = 5e-32 Identities = 290/425 (68%), Gaps = 4/425 (1%) Strand=Plus/Minus Query 118117 GATGTCGTCAAAGACGATCGACGGATC--TGCCAGGATGTTACGGATGATATGGGTGTAT 118174 ||| || || || || | | |||||| || || || || |||||||||||||| || Sbjct 4762 GATATCATCGAACACCAGTGCCGGATCGTTGACA--ATATTGCGGATGATATGGGTATAG 4705 Query 118175 GAGCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCGACCCATGTTTCCAGGGTTGTG 118234 || || || ||||| || || || ||||| || || | ||| ||||||| || | Sbjct 4704 GAACGGGAATGGATGGTTTCTGAAAATGCCCAGGTTTCTATCCAGGTTTCCAACTCTGGG 4645 Query 118235 TCGGACACGATCGGGAGCAGAACTGCATTCGGCCCACGGCCCTGTACAGAATCCAGAAGG 118294 ||| | | ||| | || | | ||||| | || || || | || ||||| || Sbjct 4644 ATGGAGATCAGCGGTAACAATGCGACGTTCGGGCTGCGTCCTTGAATGGAGTCCAGCAGT 4585 Query 118295 ATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG 118354 | ||||| ||||| |||||||||||||||||||| || || || || || | ||| Sbjct 4584 GTTTGGTATTTCAGATTGCTGATGAAGATGTGCTTTTCATGTTCTGGTAGCGCCTGATAG 4525 Query 118355 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 118414 ||||| || || || | ||| | || ||||| ||||||||||| || | || || ||| Sbjct 4524 TCGATGCGATCGCGAGACACATCCACCTCTTCTGGACGCCAGAAAAAGGAGAGCTGTTTC 4465 Query 118415 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 118474 || |||||||||||||| | | | ||| ||||| || || || | ||||| | | Sbjct 4464 TCTATCAGCTTCTCGAATATTTCATATTTTTGCTGATCGTAACGCGCTACGTTAACGGAC 4405 Query 118475 TCGCCGAGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAA 118534 | || | ||||||||| | || |||| ||| ||||| ||| ||| | ||| Sbjct 4404 TGACCAAAGAACATCGGTTCCAGAAGCTGATCGTTTTTATTCTGTGAGAAGGTGGTATAA 4345 Query 118535 GACAT 118539 | ||| Sbjct 4344 GCCAT 4340 Score = 134 bits (148), Expect = 1e-26 Identities = 134/174 (77%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 117821 TTCAGCATATACTGAGTGCCGGACAAATGCAAGGCTTCATCACGGGCAATCAGTTCAATA 117880 |||||||||| ||| || |||| || |||| |||||||| ||||| ||||||| ||| Sbjct 5091 TTCAGCATATGCTGGGTACCGGTCAGGTGCAGCGCTTCATCGCGGGCGATCAGTTTGATA 5032 Query 117881 ATGTTGGTGTTGCCCAGCATTACCCCGCGCTCGCCGAACGCAAATGAGCAGGCGAAGCTC 117940 || |||| ||||||| ||| | |||| ||| | || || |||||||||||||| || Sbjct 5031 ATTTTGGCGTTGCCCTCCATCAGTTCGCGTTCGGCAAAGGCGAATGAGCAGGCGAAACTG 4972 Query 117941 ACGTAGAAGCGGATCGCTTCCAGTGCGTTGATATTGTGCAGGCACAGGTACAGC 117994 || || || ||||| |||||||| ||||||| | ||||||||| || ||| Sbjct 4971 ACATAAAAACGGATGGCTTCCAGCGCGTTGACGCTCATCAGGCACAGATAAAGC 4918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477521913738240