Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq2351 237 1e-57
>seq2351
Length=10305
Score = 237 bits (262), Expect = 1e-57
Identities = 1055/1658 (64%), Gaps = 16/1658 (1%)
Strand=Plus/Plus
Query 71101 CGTATGAATTACATCAAAGAGTGGTATGATGCAACAAGTACATTTGAGCTATCATTACCA 71160
||| || ||||| ||||| | ||||| || | ||| || || | ||||| |||
Sbjct 2532 CGTCTGGATTACGTCAAACGCTTCTATGACGCGATTTCTACCTTCAAGATTTCATTGCCA 2591
Query 71161 ACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAGATT 71220
|| || || ||| || || ||||| ||||| | || || || || || ||||
Sbjct 2592 ACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTGATT 2651
Query 71221 GACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTA 71280
|| | ||||| ||||| ||||| ||||| ||| | || ||| | || || || || ||
Sbjct 2652 GAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATACGTT 2711
Query 71281 TCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATA 71340
|| | ||||| |||||||| || || | || |||||||| | || || || ||
Sbjct 2712 TCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCGATT 2771
Query 71341 CGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCA 71400
||| |||||||||| | |||||||| | || || |||| || |||||||| || |||
Sbjct 2772 CGCGGTGGTGAAGCATTCCATACTGGCTGTATTCCTTTCTATAAACATTTCCAGACCGCA 2831
Query 71401 GTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATG 71460
|| ||||| ||||| ||||| || | || || || || || || ||| ||||| ||
Sbjct 2832 GTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTACCCGCTG 2891
Query 71461 TGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAAC 71520
|||||| | ||||| |||||||| | || |||| || ||| || || |||| |||
Sbjct 2892 TGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGAAGGCAAC 2951
Query 71521 CGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTGATT 71580
|| || ||||| | || || | ||||| || || ||||| ||||| || || || |
Sbjct 2952 CGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCGCCTGGTC 3011
Query 71581 ACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCATTC 71640
| ||| | || || ||||| || || || || | |||||| ||||
Sbjct 3012 AAAGGACAAGAAATCACCCTGTTCAGCCCCTCTGACGTACCCGGCCTGTATGACGCATTT 3071
Query 71641 TTTGCCGACCAAGATAAGTTTGAAAAGTTATATACTGAAGC-TGAAGGTAATCCTATGAT 71699
|| ||||| || ||| |||| ||| |||||| | | || |||| || | | |
Sbjct 3072 TTCGCCGATCAGGATGAGTTCGAACGCTTATAT-CAGCAGTATGAAA--AAGACGAC-AG 3127
Query 71700 TATCCAAAAG---TCAGTAAAAGCTAGTGACTTATTTACATTGTTTGCACAAGAGCGAGC 71756
|||| ||| || | ||||| || | || | || | ||||| || ||
Sbjct 3128 CATCCGCAAGAAATCCATGAAAGCGGTCGATCTGTTCTCGCTGATGATGCAAGAACGCGC 3187
Query 71757 AGGTACAGGTCGTATCTATCTTCAAAACGTAGATCACTGTAATACCAATAGCCCATTTAT 71816
||| || |||||||| |||| | || ||||| || || ||| | ||||| |||
Sbjct 3188 CTCTACCGGCCGTATCTACATTCAGCATGTCGATCATTGCAACACCCACAGCCCGTTTGA 3247
Query 71817 TGCAGAAGTTGCCCCTATTCGTATGAGTAACTTATGCCTTGAAATTGCATTACCAACTGA 71876
| | || || | ||| | ||| | ||||| |||||||| | ||||| |
Sbjct 3248 ACCGACCATCGCACCAGTGCGTCAGTCCAACCTGTGCCTGGAAATTGCGCTGCCAACCCA 3307
Query 71877 ACCTATGCAGGATATTAATAAGCCTGAAGGTGAAATTGCATTATGTACATTAGCTGCATT 71936
||| | | || | || | ||||||| || || | || || | | || ||
Sbjct 3308 CCCTGAGGAAGACGTCAACGACGAAAAAGGTGAGATCGCGCTCTGCACCCTCTCCGCGTT 3367
Query 71937 CAATCTTGGTGCCATTAAAGATTTAGGTCGTATGGAAAAATTATCCGAATTAGTTATTA- 71995
||| ||||| || ||| || | || | | | || ||| || | | | ||
Sbjct 3368 CAACCTTGGCGC-ATTGAATAGCCTGGATGATTTGGAAGATTTGGCGCGTCTGGCAGTAC 3426
Query 71996 GAGCATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCTGAAAATGCTA 72055
| || | || || | | || || |||||||| || || || || || || | |
Sbjct 3427 GTGCGCTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGCCGCCAAACGCGGTG 3486
Query 72056 CCAAGCGAAGACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTAGCTAAAA 72115
| | | | | || || | || | ||| |||| || | ||| | | | || ||||
Sbjct 3487 CTATGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTACTATCTGGCGAAAA 3546
Query 72116 ATGGTGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCATGAACTCTTCGAAAGTT 72175
| || ||| || || |||||||||||||||||| | || || | ||| |||
Sbjct 3547 ACGGCGTTCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAAGACCTTTGAAGCCA 3606
Query 72176 TTCAGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGCTTGTCCTG 72235
||||||| ||||| || |||| || | || ||||| || || || ||
Sbjct 3607 TTCAGTACTACCTGCTGCAAGCCTCAAACGAGCTGGCGCGCGAACAGGGTGCCTGCCCGT 3666
Query 72236 CATTCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAATAAGTCAG 72295
|| | | || || ||| | | || | | ||||||||| ||| || | | |
Sbjct 3667 GGTTTGACCAAACTACCTATGCCCGTGGCGTGCTGCCTATTGACACCTACAA-ACGCGAT 3725
Query 72296 -TAGATGGTATTCATAGTGAAGAGTTACATCTTCCG--TGGGAGCAATTGAGAGAAGATA 72352
| || || ||| || ||| ||| ||| | || ||||| | || | || ||
Sbjct 3726 CTGGACGGCATTTGCAGCGAACCGTTGCAT--TACGATTGGGAAGCACTGCGCGACAGTA 3783
Query 72353 TTTTGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTT 72412
| | | ||||| ||||||| || || | || | |||||||| ||||| |
Sbjct 3784 TCAAAACACACGGTCTACGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCGT 3843
Query 72413 CTCAGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAG 72472
| || | || || || || || ||||| |||||||| |||||| || || || || |
Sbjct 3844 CACAAATTTCCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAGG 3903
Query 72473 CAAGTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGACT 72532
| ||||| || || ||| || || || || || | || || ||| ||
Sbjct 3904 CGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCGGATTACGAAACCCTGAAGGATGCCT 3963
Query 72533 ATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGC 72592
| ||||| ||||| | || || | |||| | ||||| | || | |||| | ||||
Sbjct 3964 ACGAATTACTGTGGGAAATGCCGAACAATGACGGCTACCTGCAACTGGTTGGGCTGATGC 4023
Query 72593 AAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAA 72652
| ||||||||||||||||| || ||||| ||||| || || || || | ||| |
Sbjct 4024 AGAAGTTTGTCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGCTTCCCGT 4083
Query 72653 ATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTG 72712
|| ||||| || | || || | || | || || | | ||||||| | ||
Sbjct 4084 CAGGAAAAGTGCCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGT 4143
Query 72713 TTAAAACATTCTATTACCATAACACCCGTGATGGTGCC 72750
| ||||| | ||||| || ||||||||||| ||||||
Sbjct 4144 TGAAAACGCTGTATTATCAAAACACCCGTGACGGTGCC 4181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335654166979456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |