Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq2351 237 1e-57 >seq2351 Length=10305 Score = 237 bits (262), Expect = 1e-57 Identities = 1055/1658 (64%), Gaps = 16/1658 (1%) Strand=Plus/Plus Query 71101 CGTATGAATTACATCAAAGAGTGGTATGATGCAACAAGTACATTTGAGCTATCATTACCA 71160 ||| || ||||| ||||| | ||||| || | ||| || || | ||||| ||| Sbjct 2532 CGTCTGGATTACGTCAAACGCTTCTATGACGCGATTTCTACCTTCAAGATTTCATTGCCA 2591 Query 71161 ACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAGATT 71220 || || || ||| || || ||||| ||||| | || || || || || |||| Sbjct 2592 ACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTGATT 2651 Query 71221 GACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTA 71280 || | ||||| ||||| ||||| ||||| ||| | || ||| | || || || || || Sbjct 2652 GAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATACGTT 2711 Query 71281 TCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATA 71340 || | ||||| |||||||| || || | || |||||||| | || || || || Sbjct 2712 TCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCGATT 2771 Query 71341 CGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCA 71400 ||| |||||||||| | |||||||| | || || |||| || |||||||| || ||| Sbjct 2772 CGCGGTGGTGAAGCATTCCATACTGGCTGTATTCCTTTCTATAAACATTTCCAGACCGCA 2831 Query 71401 GTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATG 71460 || ||||| ||||| ||||| || | || || || || || || ||| ||||| || Sbjct 2832 GTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTACCCGCTG 2891 Query 71461 TGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAAC 71520 |||||| | ||||| |||||||| | || |||| || ||| || || |||| ||| Sbjct 2892 TGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGAAGGCAAC 2951 Query 71521 CGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTGATT 71580 || || ||||| | || || | ||||| || || ||||| ||||| || || || | Sbjct 2952 CGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCGCCTGGTC 3011 Query 71581 ACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCATTC 71640 | ||| | || || ||||| || || || || | |||||| |||| Sbjct 3012 AAAGGACAAGAAATCACCCTGTTCAGCCCCTCTGACGTACCCGGCCTGTATGACGCATTT 3071 Query 71641 TTTGCCGACCAAGATAAGTTTGAAAAGTTATATACTGAAGC-TGAAGGTAATCCTATGAT 71699 || ||||| || ||| |||| ||| |||||| | | || |||| || | | | Sbjct 3072 TTCGCCGATCAGGATGAGTTCGAACGCTTATAT-CAGCAGTATGAAA--AAGACGAC-AG 3127 Query 71700 TATCCAAAAG---TCAGTAAAAGCTAGTGACTTATTTACATTGTTTGCACAAGAGCGAGC 71756 |||| ||| || | ||||| || | || | || | ||||| || || Sbjct 3128 CATCCGCAAGAAATCCATGAAAGCGGTCGATCTGTTCTCGCTGATGATGCAAGAACGCGC 3187 Query 71757 AGGTACAGGTCGTATCTATCTTCAAAACGTAGATCACTGTAATACCAATAGCCCATTTAT 71816 ||| || |||||||| |||| | || ||||| || || ||| | ||||| ||| Sbjct 3188 CTCTACCGGCCGTATCTACATTCAGCATGTCGATCATTGCAACACCCACAGCCCGTTTGA 3247 Query 71817 TGCAGAAGTTGCCCCTATTCGTATGAGTAACTTATGCCTTGAAATTGCATTACCAACTGA 71876 | | || || | ||| | ||| | ||||| |||||||| | ||||| | Sbjct 3248 ACCGACCATCGCACCAGTGCGTCAGTCCAACCTGTGCCTGGAAATTGCGCTGCCAACCCA 3307 Query 71877 ACCTATGCAGGATATTAATAAGCCTGAAGGTGAAATTGCATTATGTACATTAGCTGCATT 71936 ||| | | || | || | ||||||| || || | || || | | || || Sbjct 3308 CCCTGAGGAAGACGTCAACGACGAAAAAGGTGAGATCGCGCTCTGCACCCTCTCCGCGTT 3367 Query 71937 CAATCTTGGTGCCATTAAAGATTTAGGTCGTATGGAAAAATTATCCGAATTAGTTATTA- 71995 ||| ||||| || ||| || | || | | | || ||| || | | | || Sbjct 3368 CAACCTTGGCGC-ATTGAATAGCCTGGATGATTTGGAAGATTTGGCGCGTCTGGCAGTAC 3426 Query 71996 GAGCATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCTGAAAATGCTA 72055 | || | || || | | || || |||||||| || || || || || || | | Sbjct 3427 GTGCGCTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGCCGCCAAACGCGGTG 3486 Query 72056 CCAAGCGAAGACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTAGCTAAAA 72115 | | | | | || || | || | ||| |||| || | ||| | | | || |||| Sbjct 3487 CTATGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTACTATCTGGCGAAAA 3546 Query 72116 ATGGTGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCATGAACTCTTCGAAAGTT 72175 | || ||| || || |||||||||||||||||| | || || | ||| ||| Sbjct 3547 ACGGCGTTCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAAGACCTTTGAAGCCA 3606 Query 72176 TTCAGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGCTTGTCCTG 72235 ||||||| ||||| || |||| || | || ||||| || || || || Sbjct 3607 TTCAGTACTACCTGCTGCAAGCCTCAAACGAGCTGGCGCGCGAACAGGGTGCCTGCCCGT 3666 Query 72236 CATTCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAATAAGTCAG 72295 || | | || || ||| | | || | | ||||||||| ||| || | | | Sbjct 3667 GGTTTGACCAAACTACCTATGCCCGTGGCGTGCTGCCTATTGACACCTACAA-ACGCGAT 3725 Query 72296 -TAGATGGTATTCATAGTGAAGAGTTACATCTTCCG--TGGGAGCAATTGAGAGAAGATA 72352 | || || ||| || ||| ||| ||| | || ||||| | || | || || Sbjct 3726 CTGGACGGCATTTGCAGCGAACCGTTGCAT--TACGATTGGGAAGCACTGCGCGACAGTA 3783 Query 72353 TTTTGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTT 72412 | | | ||||| ||||||| || || | || | |||||||| ||||| | Sbjct 3784 TCAAAACACACGGTCTACGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCGT 3843 Query 72413 CTCAGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAG 72472 | || | || || || || || ||||| |||||||| |||||| || || || || | Sbjct 3844 CACAAATTTCCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAGG 3903 Query 72473 CAAGTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGACT 72532 | ||||| || || ||| || || || || || | || || ||| || Sbjct 3904 CGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCGGATTACGAAACCCTGAAGGATGCCT 3963 Query 72533 ATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGC 72592 | ||||| ||||| | || || | |||| | ||||| | || | |||| | |||| Sbjct 3964 ACGAATTACTGTGGGAAATGCCGAACAATGACGGCTACCTGCAACTGGTTGGGCTGATGC 4023 Query 72593 AAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAA 72652 | ||||||||||||||||| || ||||| ||||| || || || || | ||| | Sbjct 4024 AGAAGTTTGTCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGCTTCCCGT 4083 Query 72653 ATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTG 72712 || ||||| || | || || | || | || || | | ||||||| | || Sbjct 4084 CAGGAAAAGTGCCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGT 4143 Query 72713 TTAAAACATTCTATTACCATAACACCCGTGATGGTGCC 72750 | ||||| | ||||| || ||||||||||| |||||| Sbjct 4144 TGAAAACGCTGTATTATCAAAACACCCGTGACGGTGCC 4181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335654166979456